RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 ANKRD12Q6UB98 2062 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 ANKUB1A6NFN9 424 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 OPN1LWP04000 364 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 TLE4Q04727 773 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 COL9A2Q14055 689 aaPredicted RBP13.34□□□□□ -0.27
SNPH-203ENST00000614659 AGERQ15109 404 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 TSSK2Q96PF2 358 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 OR2A14Q96R47 310 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 DEFB127Q9H1M4 99 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 OTOL1A6NHN0 477 aaPredicted RBP13.33□□□□□ -0.27
SNPH-203ENST00000614659 C21orf140B9A014 251 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 CTXN2P0C2S0 81 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 ANXA7P20073 488 aaKnown RBP13.33□□□□□ -0.27
SNPH-203ENST00000614659 TAS2R30P59541 319 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 BAK1Q16611 211 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 VWA2Q5GFL6 755 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 OR10K2Q6IF99 312 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 KIRREL2Q6UWL6 708 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 SSX9Q7RTT3 188 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 FYTTD1Q96QD9 318 aaKnown RBP13.33□□□□□ -0.27
SNPH-203ENST00000614659 ABHD6Q9BV23 337 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 SIGLEC7Q9Y286 467 aa13.33□□□□□ -0.27
SNPH-203ENST00000614659 ANKRD9Q96BM1 317 aaPredicted RBP13.33□□□□□ -0.28
SNPH-203ENST00000614659 FAM122AQ96E09 287 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 BTF3L4Q96K17 158 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 TRIB1Q96RU8 372 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 ISG20L2Q9H9L3 353 aaKnown RBP13.33□□□□□ -0.28
SNPH-203ENST00000614659 TAS2R5Q9NYW4 299 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 PIGLQ9Y2B2 252 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 PCDHGA1Q9Y5H4 931 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 IGHV3-20A0A0C4DH32 117 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 XRCC3O43542 346 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 PMP2P02689 132 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 NME2P22392 152 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 ABI3BPQ7Z7G0 1075 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 LFNGQ8NES3 379 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 MFRPQ9BY79 579 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 NKX6-2Q9C056 277 aaPredicted RBP13.33□□□□□ -0.28
SNPH-203ENST00000614659 SERTAD4Q9NUC0 356 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 PCYT1BQ9Y5K3 369 aaPredicted RBP13.33□□□□□ -0.28
SNPH-203ENST00000614659 PLXNB2O15031 1838 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 ARPC3O15145 178 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 OR7C1O76099 320 aaPredicted RBP13.33□□□□□ -0.28
SNPH-203ENST00000614659 AKR7A3O95154 331 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 COL9A1P20849 921 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 MAGEB1P43366 347 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
SNPH-203ENST00000614659 SYT9Q86SS6 491 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 SGK3Q96BR1 496 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 LURAP1Q96LR2 239 aa13.33□□□□□ -0.28
SNPH-203ENST00000614659 PRSS44E7EML9 344 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 NUBP1P53384 320 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 FXNQ16595 210 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 PLXDC2Q6UX71 529 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 DPPA2Q7Z7J5 298 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 DVL3Q92997 716 aaPredicted RBP13.32□□□□□ -0.28
SNPH-203ENST00000614659 ANKRD10Q9NXR5 420 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
SNPH-203ENST00000614659 C2orf72A6NCS6 295 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 BTBD17A6NE02 478 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 HRO43593 1189 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 HBG1P69891 147 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 HBG2P69892 147 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 ZNF74Q16587 644 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 TMEM41BQ5BJD5 291 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 PXDC1Q5TGL8 231 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 WDR74Q6RFH5 385 aaPredicted RBP13.32□□□□□ -0.28
SNPH-203ENST00000614659 TMEM229BQ8NBD8 167 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 SPACA1Q9HBV2 294 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 SLC5A6Q9Y289 635 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 TP53TG5Q9Y2B4 290 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 C17orf112F2Z3M2 114 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 LHFPL2Q6ZUX7 228 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 OR2G2Q8NGZ5 317 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 CGGBP1Q9UFW8 167 aaPredicted RBP13.32□□□□□ -0.28
SNPH-203ENST00000614659 KIR2DS1A0A191URI9 304 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 A0A1W2PPV4 95 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 DOK2O60496 412 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 F10P00742 488 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 GSTP1P09211 210 aaKnown RBP13.32□□□□□ -0.28
SNPH-203ENST00000614659 KIR2DS4P43632 304 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 BTG2P78543 158 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 KIR2DS1Q14954 304 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 ELFN2Q5R3F8 820 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 TMEM215Q68D42 235 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 SEC22AQ96IW7 307 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 NEURL2Q9BR09 285 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 SIRT3Q9NTG7 399 aaPredicted RBP13.32□□□□□ -0.28
SNPH-203ENST00000614659 HDGFL3Q9Y3E1 203 aa13.32□□□□□ -0.28
SNPH-203ENST00000614659 PNLIPP16233 465 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 IKZF1Q13422 519 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 DDOQ99489 341 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 WWTR1Q9GZV5 400 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 OR10A3P58181 314 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 SSX1Q16384 188 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNPH-203ENST00000614659 VHLLQ6RSH7 139 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 ACOT7LQ6ZUV0 252 aa13.31□□□□□ -0.28
SNPH-203ENST00000614659 ARHGEF39Q8N4T4 335 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms