RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 OR52N1Q8NH53 320 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 ZNF799Q96GE5 643 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 MND1Q9BWT6 205 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 ZNF696Q9H7X3 374 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 GRIP1Q9Y3R0 1128 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 SPEF1Q9Y4P9 236 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 DOPEY1Q5JWR5 2465 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 IGHV2OR16-5A0A0B4J2B6 119 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 ACSM4P0C7M7 580 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 ZNF35P13682 527 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 PCSK6P29122 969 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 SLC6A9P48067 706 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 CX3CR1P49238 355 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 RGS6P49758 472 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 BSPH1Q075Z2 132 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 IRF3Q14653 427 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 DAZAP2Q15038 168 aaPredicted RBP12.73□□□□□ -0.37
CD48-203ENST00000613788 ZNF829Q3KNS6 432 aaPredicted RBP12.73□□□□□ -0.37
CD48-203ENST00000613788 ZNF773Q6PK81 442 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 PLPPR2Q96GM1 343 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 RADILQ96JH8 1075 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 C4orf45Q96LM5 186 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 ISG20L2Q9H9L3 353 aaKnown RBP12.73□□□□□ -0.37
CD48-203ENST00000613788 KCNN3Q9UGI6 736 aa12.73□□□□□ -0.37
CD48-203ENST00000613788 SPTBN1Q01082 2364 aaKnown RBP12.73□□□□□ -0.37
CD48-203ENST00000613788 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 TMEM269A0A1B0GVZ9 245 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 ACOD1A6NK06 481 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 RPP14O95059 124 aaKnown RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 GOSR1O95249 250 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 ABHD16AO95870 558 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 CD3EP07766 207 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 HTR1AP08908 422 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 RAD52P43351 418 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 MMP16P51512 607 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 GBX2P52951 348 aaPredicted RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 WNT4P56705 351 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 OR2G6Q5TZ20 316 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 ZNF544Q6NX49 715 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 C1orf174Q8IYL3 243 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 TSPAN14Q8NG11 270 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 SPRYD4Q8WW59 207 aaPredicted RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 GATAD2BQ8WXI9 593 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 DOK1Q99704 481 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 TBCCD1Q9NVR7 557 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 BABAM2Q9NXR7 383 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 R4GMQ9 66 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 A0A087WXM4 84 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 J3QW42 95 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 ABCD4O14678 606 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 ICMTO60725 284 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 LCATP04180 440 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 COX6B1P14854 86 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 CDH15P55291 814 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 UCP2P55851 309 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 ZNF121P58317 390 aaPredicted RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 PSMA6P60900 246 aaKnown RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 SPARTQ8N0X7 666 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 PAQR4Q8N4S7 273 aaPredicted RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 APOBEC3DQ96AK3 386 aaPredicted RBP12.72□□□□□ -0.37
CD48-203ENST00000613788 PELI1Q96FA3 418 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 COG8Q96MW5 612 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 C1QTNF5Q9BXJ0 243 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 ACOXLQ9NUZ1 547 aa12.72□□□□□ -0.37
CD48-203ENST00000613788 DEFB108AA8MXU0 73 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 LOC110117498-PIK3R3F6TDL0 507 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 ANXA2P07355 339 aaKnown RBP12.71□□□□□ -0.38
CD48-203ENST00000613788 TUBG1P23258 451 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 CALCRP30988 508 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.38
CD48-203ENST00000613788 SPHARQ15513 63 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 MED22Q15528 200 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 TBCEQ15813 527 aaPredicted RBP12.71□□□□□ -0.38
CD48-203ENST00000613788 SLC22A25Q6T423 547 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 COLCA1Q6ZS62 124 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 NAA40Q86UY6 237 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 KLBQ86Z14 1044 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 OR52H1Q8NGJ2 320 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 OR5L1Q8NGL2 311 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 RORBQ92753 470 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 PIK3IP1Q96FE7 263 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 PSMG3-AS1Q96PY0 264 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 BCL2L14Q9BZR8 327 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 MOB1AQ9H8S9 216 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 BRD7Q9NPI1 651 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 TRIM36Q9NQ86 728 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 TUBG2Q9NRH3 451 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 FAM206AQ9NX38 181 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 N6AMT1Q9Y5N5 214 aa12.71□□□□□ -0.38
CD48-203ENST00000613788 MAGEA13PA6NCF6 341 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 NR4A1P22736 598 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 PSMB10P40306 273 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 WNT5AP41221 380 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 MAP2K4P45985 399 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 TGM4P49221 684 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 TAS2R43P59537 309 aa12.7□□□□□ -0.38
CD48-203ENST00000613788 HGFACQ04756 655 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms