RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GABRG2P18507 467 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 ADCYAP1P18509 176 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 ANOS1P23352 680 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 AGTR1P30556 359 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 EFNA3P52797 238 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 AIMP2Q13155 320 aaKnown RBP18.25■□□□□ 0.51
SSBP3-216ENST00000610401 PAN3Q58A45 887 aaKnown RBP18.25■□□□□ 0.51
SSBP3-216ENST00000610401 CLVS2Q5SYC1 327 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 ADAT3Q96EY9 351 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-216ENST00000610401 SLC19A3Q9BZV2 496 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 ELL3Q9HB65 397 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-216ENST00000610401 CHMP1AQ9HD42 196 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-216ENST00000610401 KCNK7Q9Y2U2 307 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 TMEM150CB9EJG8 249 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 KNG1P01042 644 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 FZD2Q14332 565 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 ANGPTL5Q86XS5 388 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 NUBPLQ8TB37 319 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 MRGPRFQ96AM1 343 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 FOXRED1Q96CU9 486 aaPredicted RBP18.24■□□□□ 0.51
SSBP3-216ENST00000610401 ZC3H10Q96K80 434 aaKnown RBP18.24■□□□□ 0.51
SSBP3-216ENST00000610401 PHB2Q99623 299 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 GDF2Q9UK05 429 aaPredicted RBP18.24■□□□□ 0.51
SSBP3-216ENST00000610401 A0A0D9SG52 128 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 EIF4E2O60573 245 aaKnown RBP18.24■□□□□ 0.51
SSBP3-216ENST00000610401 RORAP35398 523 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 MECP2P51608 486 aaKnown RBP18.24■□□□□ 0.51
SSBP3-216ENST00000610401 NKAPLQ5M9Q1 402 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 ACOT7LQ6ZUV0 252 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 KCNRGQ8N5I3 272 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 TMEM104Q8NE00 496 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 RRNAD1Q96FB5 475 aaKnown RBP18.24■□□□□ 0.51
SSBP3-216ENST00000610401 BGLAPP02818 100 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 SFTPBP07988 381 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 KCNJ3P48549 501 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 C1orf140Q5VVS0 124 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 GPBAR1Q8TDU6 330 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 PMM1Q92871 262 aa18.24■□□□□ 0.51
SSBP3-216ENST00000610401 SLC25A21Q9BQT8 299 aaPredicted RBP18.24■□□□□ 0.51
SSBP3-216ENST00000610401 BARX1Q9HBU1 254 aaPredicted RBP18.24■□□□□ 0.51
SSBP3-216ENST00000610401 TRAV36DV7A0A075B6V5 113 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 SERPINA5P05154 406 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 RAB3AP20336 220 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 NPBWR1P48145 328 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 ARL4DP49703 201 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 FOXK1P85037 733 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 LINC00518Q8N0U6 118 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 TMEM229BQ8NBD8 167 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 OR52N5Q8NH56 324 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 OR51F2Q8NH61 342 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 OR51E1Q8TCB6 317 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 GPER1Q99527 375 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 GABRG3Q99928 467 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 METTL8Q9H825 291 aaKnown RBP18.23■□□□□ 0.51
SSBP3-216ENST00000610401 SYT7O43581 403 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 UNC119Q13432 240 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 LCN10Q6JVE6 187 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 ZNF585AQ6P3V2 769 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 C8orf44Q96CB5 159 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 LRRC61Q9BV99 259 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 VSX1Q9NZR4 365 aaPredicted RBP18.23■□□□□ 0.51
SSBP3-216ENST00000610401 GLS2Q9UI32 602 aa18.23■□□□□ 0.51
SSBP3-216ENST00000610401 A0A1B0GW55 424 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 FAM221BA6H8Z2 402 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 METTL21EPA6NDL7 271 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 SULT2B1O00204 365 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 IL33O95760 270 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 DUX4L2P0CJ85 424 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 DUX4L3P0CJ86 424 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 DUX4L4P0CJ87 422 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 DUX4L5P0CJ88 424 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 DUX4L6P0CJ89 424 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 DUX4L7P0CJ90 424 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 TNFRSF4P43489 277 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 TGIF1Q15583 401 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 INPP5JQ15735 1006 aaPredicted RBP18.22■□□□□ 0.51
SSBP3-216ENST00000610401 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.22■□□□□ 0.51
SSBP3-216ENST00000610401 FAM69BQ5VUD6 431 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 LYG2Q86SG7 212 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 ZNF248Q8NDW4 579 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 PELOQ9BRX2 385 aaKnown RBP18.22■□□□□ 0.51
SSBP3-216ENST00000610401 DNTTIP1Q9H147 329 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 DUX4Q9UBX2 424 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 NPIPA5E9PKD4 350 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 AHSA1O95433 338 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 BCKDHBP21953 392 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 MOB3CQ70IA8 216 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 CATSPERDQ86XM0 798 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 C9orf40Q8IXQ3 194 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 ZNF440Q8IYI8 595 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 SLC43A2Q8N370 569 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 OR4K17Q8NGC6 315 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 FN3KRPQ9HA64 309 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 NPIPA1Q9UND3 350 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 IGLV1-36A0A0B4J1U3 117 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 RAB27BO00194 218 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 SOCS1O15524 211 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 IGHV4-34P06331 123 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 NME2P22392 152 aa18.22■□□□□ 0.51
SSBP3-216ENST00000610401 FNDC7Q5VTL7 733 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms