RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 UFSP2Q9NUQ7 469 aa14.39□□□□□ -0.11
CHMP4A-211ENST00000609024 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHMP4A-211ENST00000609024 V9GYY5 206 aaPredicted RBP14.39□□□□□ -0.11
CHMP4A-211ENST00000609024 TRAV27A0A087WT01 109 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 A0A0U1RQK1 487 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 ANKRD61A6NGH8 418 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 IQCF6A8MYZ5 107 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 EFCAB9A8MZ26 197 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 G3V4G9 280 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 ADAM20O43506 726 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 HLA-DPB1P04440 258 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 PSMB10P40306 273 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 GATA4P43694 442 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 OR1E2P47887 323 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 MAGOHP61326 146 aaKnown RBP14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 ZNF841Q6ZN19 808 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 Q6ZSV7 163 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 CCDC80Q76M96 950 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 LDLRAD3Q86YD5 345 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 PDZD9Q8IXQ8 264 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 DPP10Q8N608 796 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 C10orf82Q8WW14 230 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 LZICQ8WZA0 190 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 C7orf26Q96N11 449 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 FN3KRPQ9HA64 309 aa14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.38□□□□□ -0.11
CHMP4A-211ENST00000609024 TEX13CA0A0J9YWL9 993 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 ZNF816-ZNF321PA0A0X1KG74 233 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 AHCYL1O43865 530 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 FAM20BO75063 409 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 DBHP09172 617 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 CENPAP49450 140 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 LSM6P62312 80 aaKnown RBP14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 ARF6P62330 175 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 MALLQ13021 153 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 BEAN1Q3B7T3 259 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 SFRP4Q6FHJ7 346 aaPredicted RBP14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 GLB1L2Q8IW92 636 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 CELF2-AS1Q8N7Q2 184 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 LRRC8CQ8TDW0 803 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 SPRYD4Q8WW59 207 aaPredicted RBP14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 SH3GL1Q99961 368 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 C16orf95Q9H693 158 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 WDR76Q9H967 626 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 RNF7Q9UBF6 113 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 ATPIF1Q9UII2 106 aa14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 NOP16Q9Y3C1 178 aaKnown RBP14.37□□□□□ -0.11
CHMP4A-211ENST00000609024 TET2Q6N021 2002 aaPredicted RBP14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 NDUFA2O43678 99 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 SLC16A7O60669 478 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 KHDRBS3O75525 346 aaKnown RBP14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 FBP1P09467 338 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 MMP9P14780 707 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 TGFBR2P37173 567 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 PMELP40967 661 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 SLC9A3P48764 834 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 EGR3Q06889 387 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 CYLC2Q14093 348 aaPredicted RBP14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 NRMQ8IXM6 262 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 GALNT4Q8N4A0 578 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 LRRC75AQ8NAA5 344 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 GJC3Q8NFK1 279 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 Q8TCH9 128 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 MRAPQ8TCY5 172 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 TPD52L3Q96J77 140 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 ZNF570Q96NI8 536 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 ECSITQ9BQ95 431 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 PARD6BQ9BYG5 372 aa14.36□□□□□ -0.11
CHMP4A-211ENST00000609024 TRAV38-1A0A0B4J264 116 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 PRSS37A4D1T9 235 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 LGALS8O00214 317 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 RER1O15258 196 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 ECDO95905 644 aaPredicted RBP14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 PAHP00439 452 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 PRB2P02812 416 aaPredicted RBP14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 EEF1B2P24534 225 aaKnown RBP14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 OR8G1Q15617 311 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 CCDC92Q53HC0 331 aaPredicted RBP14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 BEND6Q5SZJ8 279 aaPredicted RBP14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 PRAMEF6Q5VXH4 476 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 RRM2BQ7LG56 351 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 PPP1R14AQ96A00 147 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 PRRC1Q96M27 445 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 Q96M85 177 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 FNDC11Q9BVV2 318 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 HDHD2Q9H0R4 259 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 VPREB3Q9UKI3 123 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 COA3Q9Y2R0 106 aaPredicted RBP14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 ADAM18Q9Y3Q7 739 aa14.35□□□□□ -0.11
CHMP4A-211ENST00000609024 OPN1MWP04001 364 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 CD14P08571 375 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 OPN1MW2P0DN77 364 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 OPN1MW3P0DN78 364 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 CTLA4P16410 223 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 CD200P41217 278 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 MAB21L1Q13394 359 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 LRRC23Q53EV4 343 aaPredicted RBP14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 OTPQ5XKR4 325 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 ERICH5Q6P6B1 374 aa14.34□□□□□ -0.11
CHMP4A-211ENST00000609024 Q6ZPA2 131 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms