RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 NHLRC1Q6VVB1 395 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 LINGO2Q7L985 606 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 HDDC2Q7Z4H3 204 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 OR6V1Q8N148 313 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 OTOSQ8NHW6 89 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ASB10Q8WXI3 467 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 MCHR2Q969V1 340 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 UCN2Q96RP3 112 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 SF3B5Q9BWJ5 86 aaKnown RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 SRXN1Q9BYN0 137 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 TAS2R8Q9NYW2 309 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 VSX1Q9NZR4 365 aaPredicted RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 BOLA1Q9Y3E2 137 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 LIPGQ9Y5X9 500 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 PTPRQQ9UMZ3 2332 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 MGAQ8IWI9 3026 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 MEIKINA0A087WXM9 373 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 A0A1W2PPK0 400 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 ANKRD20A5PA0PJZ0 165 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 ACOD1A6NK06 481 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 PRR32B1ATL7 298 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 SMAD9O15198 467 aaKnown RBP10.36□□□□□ -0.75
VRK3-223ENST00000601341 FABP7O15540 132 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 RAMP1O60894 148 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 OR8G3PP0DMU2 310 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 CPN1P15169 458 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 KLK2P20151 261 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 PSMB1P20618 241 aaKnown RBP10.36□□□□□ -0.75
VRK3-223ENST00000601341 PTH2RP49190 550 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 SRP9P49458 86 aaKnown RBP10.36□□□□□ -0.75
VRK3-223ENST00000601341 SRYQ05066 204 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 DBPQ10586 325 aaPredicted RBP10.36□□□□□ -0.75
VRK3-223ENST00000601341 MELKQ14680 651 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 POU4F3Q15319 338 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 TEX30Q5JUR7 227 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 METTL11BQ5VVY1 283 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 LRRTM1Q86UE6 522 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 C9orf62Q8N4C0 152 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 ZNF454Q8N9F8 522 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 GPR137Q96N19 417 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 TTTY10Q9BZA0 68 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 MED29Q9NX70 200 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 OR5V1Q9UGF6 321 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 FOXJ3Q9UPW0 622 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 TP53TG5Q9Y2B4 290 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 MRPS7Q9Y2R9 242 aaKnown RBP10.36□□□□□ -0.75
VRK3-223ENST00000601341 NCKAP5O14513 1909 aa10.36□□□□□ -0.75
VRK3-223ENST00000601341 TRAV6A0A075B6T7 132 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 IGHV3-15A0A0B4J1V0 119 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 A0A1B0GVC2 190 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 MED19A0JLT2 244 aaPredicted RBP10.35□□□□□ -0.75
VRK3-223ENST00000601341 TMEM8BA6NDV4 472 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 A6NIN4 97 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 NPIPA2E9PIF3 369 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 NPIPA3F8WFD2 350 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 TRAF3IP2O43734 574 aaPredicted RBP10.35□□□□□ -0.75
VRK3-223ENST00000601341 FAUP35544 74 aaKnown RBP10.35□□□□□ -0.75
VRK3-223ENST00000601341 BIDP55957 195 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 SLC17A1Q14916 467 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 PLEKHN1Q494U1 663 aaPredicted RBP10.35□□□□□ -0.75
VRK3-223ENST00000601341 KCTD18Q6PI47 426 aaPredicted RBP10.35□□□□□ -0.75
VRK3-223ENST00000601341 SEZ6L2Q6UXD5 910 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 FCRLAQ7L513 359 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 CHMP1BQ7LBR1 199 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 SYT9Q86SS6 491 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 PM20D2Q8IYS1 436 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 ZNF679Q8IYX0 411 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 OR11H7Q8NGC8 314 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 OR9K2Q8NGE7 335 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 OR6N2Q8NGY6 317 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 SYNPRQ8TBG9 265 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 C4orf45Q96LM5 186 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 OR8B4Q96RC9 309 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 TAAR6Q96RI8 345 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 C20orf85Q9H1P6 137 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 TSPAN10Q9H1Z9 355 aaPredicted RBP10.35□□□□□ -0.75
VRK3-223ENST00000601341 SYT4Q9H2B2 425 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 KLHL13Q9P2N7 655 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 STEAP1Q9UHE8 339 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 SCP2D1Q9UJQ7 156 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 LHX6Q9UPM6 363 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 FREM3P0C091 2139 aa10.35□□□□□ -0.75
VRK3-223ENST00000601341 A0A0B4J203 849 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 SLC22A23A1A5C7 686 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 ZNF726A6NNF4 738 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 H7C1C5 153 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 DCTN6O00399 190 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 ZNF593O00488 134 aaPredicted RBP10.34□□□□□ -0.75
VRK3-223ENST00000601341 XRCC3O43542 346 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 SYNGR4O95473 234 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 CRYABP02511 175 aaKnown RBP10.34□□□□□ -0.75
VRK3-223ENST00000601341 IL5P05113 134 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 CD37P11049 281 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 CRABP1P29762 137 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 CAPZA1P52907 286 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 LCN6P62502 163 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 GALK2Q01415 458 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 TMEM69Q5SWH9 247 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 HES5Q5TA89 166 aa10.34□□□□□ -0.75
VRK3-223ENST00000601341 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms