RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ERFP50548 548 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 BTG1P62324 171 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 HLXQ14774 488 aaPredicted RBP13.32□□□□□ -0.28
VRK3-221ENST00000600284 OR2T2Q6IF00 324 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 CORO6Q6QEF8 472 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 MUC20Q8N307 709 aaPredicted RBP13.32□□□□□ -0.28
VRK3-221ENST00000600284 OR52L1Q8NGH7 329 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 OR52E2Q8NGJ4 325 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 SIGLEC11Q96RL6 698 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 JMJD8Q96S16 334 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 PITX2Q99697 317 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 ATF6BQ99941 703 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 SLC30A2Q9BRI3 323 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 HCAR1Q9BXC0 346 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 MUC13Q9H3R2 512 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 C7orf69Q9H7B7 122 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 GCM1Q9NP62 436 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 DCAF16Q9NXF7 216 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 IL20Q9NYY1 176 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 LYVE1Q9Y5Y7 322 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 CDH10Q9Y6N8 788 aa13.32□□□□□ -0.28
VRK3-221ENST00000600284 TMEM178BH3BS89 294 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 TNFRSF11BO00300 401 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 FSTL3O95633 263 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 HLA-DQA2P01906 255 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 ACSM4P0C7M7 580 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 ZFP36P26651 326 aaKnown RBP13.31□□□□□ -0.28
VRK3-221ENST00000600284 GGT2P36268 569 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 SLC6A9P48067 706 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 GYS2P54840 703 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 HILS1P60008 231 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 LCN2P80188 198 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.31□□□□□ -0.28
VRK3-221ENST00000600284 ZNF181Q2M3W8 571 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.31□□□□□ -0.28
VRK3-221ENST00000600284 OR5AS1Q8N127 324 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 SDR9C7Q8NEX9 313 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 DDOQ99489 341 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 MAGIXQ9H6Y5 334 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 DYSFO75923 2080 aa13.31□□□□□ -0.28
VRK3-221ENST00000600284 A8MXK9 166 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 F5H5K5 113 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 BHLHE40O14503 412 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 ZNF823P16415 610 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 MDH2P40926 338 aaKnown RBP13.3□□□□□ -0.28
VRK3-221ENST00000600284 TPTEP56180 551 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 MALLQ13021 153 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 ZMYND11Q15326 602 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 SLC35F1Q5T1Q4 408 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 ZNF770Q6IQ21 691 aaPredicted RBP13.3□□□□□ -0.28
VRK3-221ENST00000600284 CYP2R1Q6VVX0 501 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 CFAP77Q6ZQR2 320 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 RASSF6Q6ZTQ3 369 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 FITM2Q8N6M3 262 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 OR2T4Q8NH00 348 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 NSL1Q96IY1 281 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 MEGF10Q96KG7 1140 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 BTBD10Q9BSF8 475 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 SUCNR1Q9BXA5 334 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 EGLN3Q9H6Z9 239 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 PNRC2Q9NPJ4 139 aaKnown RBP13.3□□□□□ -0.28
VRK3-221ENST00000600284 TMEM100Q9NV29 134 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 MRPL22Q9NWU5 206 aaKnown RBP13.3□□□□□ -0.28
VRK3-221ENST00000600284 OPN4Q9UHM6 478 aa13.3□□□□□ -0.28
VRK3-221ENST00000600284 B2RBV5 119 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 F5H0A9 414 aaPredicted RBP13.29□□□□□ -0.28
VRK3-221ENST00000600284 TRIM77I1YAP6 450 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 CCNB2O95067 398 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 FSHBP01225 129 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 GASTP01350 101 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 ADRA2CP18825 462 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 GATA4P43694 442 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 MMP16P51512 607 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 TRAP1Q12931 704 aaKnown RBP13.29□□□□□ -0.28
VRK3-221ENST00000600284 TRIM25Q14258 630 aaKnown RBP13.29□□□□□ -0.28
VRK3-221ENST00000600284 CLEC12AQ5QGZ9 265 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 ZNF362Q5T0B9 420 aaPredicted RBP13.29□□□□□ -0.28
VRK3-221ENST00000600284 CELF2-AS1Q8N7Q2 184 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.29□□□□□ -0.28
VRK3-221ENST00000600284 OR4C15Q8NGM1 316 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 FAM216AQ8WUB2 273 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 SPTSSAQ969W0 71 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 ERGIC1Q969X5 290 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 BAIAP2Q9UQB8 552 aa13.29□□□□□ -0.28
VRK3-221ENST00000600284 TCRBV5S2A0A599 114 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 LRRC30A6NM36 301 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 MLNRO43193 412 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 LCATP04180 440 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 ZNF12P17014 697 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 ATP6V1B2P21281 511 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 FPR2P25090 351 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 GK3PQ14409 553 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 GK2Q14410 553 aaPredicted RBP13.28□□□□□ -0.28
VRK3-221ENST00000600284 ESCO2Q56NI9 601 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 LCN8Q6JVE9 175 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
VRK3-221ENST00000600284 DHFR2Q86XF0 187 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 C1orf87Q8N0U7 546 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 LNX2Q8N448 690 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms