RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 KCNJ15Q99712 375 aa11.78□□□□□ -0.52
VRK3-219ENST00000600137 GSX2Q9BZM3 304 aa11.78□□□□□ -0.52
VRK3-219ENST00000600137 ELOVL3Q9HB03 270 aa11.78□□□□□ -0.52
VRK3-219ENST00000600137 CENPMQ9NSP4 180 aa11.78□□□□□ -0.52
VRK3-219ENST00000600137 FAIMQ9NVQ4 179 aa11.78□□□□□ -0.52
VRK3-219ENST00000600137 BEX4Q9NWD9 120 aaPredicted RBP11.78□□□□□ -0.52
VRK3-219ENST00000600137 IMPAD1Q9NX62 359 aa11.78□□□□□ -0.52
VRK3-219ENST00000600137 EIF3KQ9UBQ5 218 aaKnown RBP11.78□□□□□ -0.52
VRK3-219ENST00000600137 ZNF878C9JN71 531 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 F5H5K5 113 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 H0YAE9 185 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 H0YHG0 523 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 H0YJX3 145 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 M0R135 149 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 RRP9O43818 475 aaKnown RBP11.77□□□□□ -0.53
VRK3-219ENST00000600137 APOL3O95236 402 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 IGHV3-13P01766 116 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 LCKP06239 509 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 LYNP07948 512 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 GNAO1P09471 354 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 PRKXP51817 358 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 ROM1Q03395 351 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 MAD2L1BPQ15013 274 aaPredicted RBP11.77□□□□□ -0.53
VRK3-219ENST00000600137 SPATA46Q5T0L3 261 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 ZNF684Q5T5D7 378 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 MEDAGQ5VYS4 303 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 MBNL2Q5VZF2 373 aaKnown RBP11.77□□□□□ -0.53
VRK3-219ENST00000600137 TTC23Q5W5X9 447 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 SPATC1Q76KD6 591 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 SSX6Q7RTT6 188 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 C1orf174Q8IYL3 243 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 ZCCHC24Q8N2G6 241 aaKnown RBP11.77□□□□□ -0.53
VRK3-219ENST00000600137 OR51G2Q8NGK0 314 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 FBLIM1Q8WUP2 373 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 ZNF799Q96GE5 643 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 CNN2Q99439 309 aaKnown RBP11.77□□□□□ -0.53
VRK3-219ENST00000600137 FOXC2Q99958 501 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 SYT3Q9BQG1 590 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 ADI1Q9BV57 179 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 CACNG6Q9BXT2 260 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 CLN6Q9NWW5 311 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 ZNF319Q9P2F9 582 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 EDARQ9UNE0 448 aa11.77□□□□□ -0.53
VRK3-219ENST00000600137 RRP15Q9Y3B9 282 aaKnown RBP11.77□□□□□ -0.53
VRK3-219ENST00000600137 H7C417 338 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 J3QW42 95 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 MAGEB4O15481 346 aaPredicted RBP11.76□□□□□ -0.53
VRK3-219ENST00000600137 CAPGP40121 348 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 PTH2RP49190 550 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 RGS6P49758 472 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 NUDT6P53370 316 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 AQP4P55087 323 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 TPTEP56180 551 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 RPS23P62266 143 aaKnown RBP11.76□□□□□ -0.53
VRK3-219ENST00000600137 PSG7Q13046 419 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 SMN1Q16637 294 aaKnown RBP11.76□□□□□ -0.53
VRK3-219ENST00000600137 DRAM2Q6UX65 266 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 LRRN1Q6UXK5 716 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 FBXW12Q6X9E4 464 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 SLC35F2Q8IXU6 374 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 LRRC75A-AS1Q8N1F1 130 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 ZNF555Q8NEP9 628 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 SYNPRQ8TBG9 265 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 CYGBQ8WWM9 190 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 IPCEF1Q8WWN9 437 aaPredicted RBP11.76□□□□□ -0.53
VRK3-219ENST00000600137 APOBEC3DQ96AK3 386 aaPredicted RBP11.76□□□□□ -0.53
VRK3-219ENST00000600137 ZNF649Q9BS31 505 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 MRPS18AQ9NVS2 196 aaKnown RBP11.76□□□□□ -0.53
VRK3-219ENST00000600137 DUSP13Q9UII6 198 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 EXOGQ9Y2C4 368 aaKnown RBP11.76□□□□□ -0.53
VRK3-219ENST00000600137 HIVEP1P15822 2718 aa11.76□□□□□ -0.53
VRK3-219ENST00000600137 VSTM5A8MXK1 200 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 H3BSA7 217 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 MPZL2O60487 215 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 SRSF10O75494 262 aaKnown RBP11.75□□□□□ -0.53
VRK3-219ENST00000600137 IGHV4-39P01824 125 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 ADRA2AP08913 450 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 TUBG1P23258 451 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 MTNR1AP48039 350 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 MMP15P51511 669 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 GRB2P62993 217 aaKnown RBP11.75□□□□□ -0.53
VRK3-219ENST00000600137 ZNF91Q05481 1191 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 HLXQ14774 488 aaPredicted RBP11.75□□□□□ -0.53
VRK3-219ENST00000600137 SNAI3Q3KNW1 292 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 ZNF718Q3SXZ3 478 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 DEGS2Q6QHC5 323 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 ARL9Q6T311 187 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 RFKQ969G6 155 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 SPTSSAQ969W0 71 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 RNF166Q96A37 237 aaPredicted RBP11.75□□□□□ -0.53
VRK3-219ENST00000600137 HAVCR1Q96D42 359 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 LGALS12Q96DT0 336 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 OR8B4Q96RC9 309 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 MNTQ99583 582 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 COPS4Q9BT78 406 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 CXorf56Q9H5V9 222 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 AMBNQ9NP70 447 aa11.75□□□□□ -0.53
VRK3-219ENST00000600137 TUBG2Q9NRH3 451 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms