RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 MRPL19P49406 292 aaKnown RBP18.55■□□□□ 0.56
UPF1-207ENST00000599848 GNG3P63215 75 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 DOC2BQ14184 412 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 FCRL1Q96LA6 429 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 OR5V1Q9UGF6 321 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 ATP1B1P05026 303 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 PPP3CBP16298 524 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 OR10P1Q8NGE3 313 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 CRISPLD2Q9H0B8 497 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 EXOSC3Q9NQT5 275 aaKnown RBP18.55■□□□□ 0.56
UPF1-207ENST00000599848 C1RLQ9NZP8 487 aa18.55■□□□□ 0.56
UPF1-207ENST00000599848 H3BMQ9 156 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 RPL18Q07020 188 aaKnown RBP18.54■□□□□ 0.56
UPF1-207ENST00000599848 FOXF1Q12946 379 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 KDM4DQ6B0I6 523 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 CCL4L1Q8NHW4 92 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 SOX7Q9BT81 388 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 KCNMB2Q9Y691 235 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 AGPAT2O15120 278 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 ACTL6AO96019 429 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 SBK2P0C263 348 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 IGFBP7Q16270 282 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 PAQR8Q8TEZ7 354 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 GNPNAT1Q96EK6 184 aaPredicted RBP18.54■□□□□ 0.56
UPF1-207ENST00000599848 PECRQ9BY49 303 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 ZNF331Q9NQX6 463 aaPredicted RBP18.54■□□□□ 0.56
UPF1-207ENST00000599848 SELENOFO60613 162 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 KLF3P57682 345 aaPredicted RBP18.54■□□□□ 0.56
UPF1-207ENST00000599848 PTRH1Q86Y79 214 aaKnown RBP18.54■□□□□ 0.56
UPF1-207ENST00000599848 OR51H1Q8NH63 302 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 ATP5SQ99766 215 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 SLC26A1Q9H2B4 701 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 YBX2Q9Y2T7 364 aaKnown RBP18.54■□□□□ 0.56
UPF1-207ENST00000599848 DLG5Q8TDM6 1919 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 TMEM129A0AVI4 362 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 KCNJ3P48549 501 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 ZNF439Q8NDP4 499 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 TEAD3Q99594 435 aa18.54■□□□□ 0.56
UPF1-207ENST00000599848 NCBP2LA6PVI3 153 aaKnown RBP18.53■□□□□ 0.56
UPF1-207ENST00000599848 AIPO00170 330 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 SPRY3O43610 288 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 FJX1Q86VR8 437 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 FAM213BQ8TBF2 198 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 BCL7CQ8WUZ0 217 aaPredicted RBP18.53■□□□□ 0.56
UPF1-207ENST00000599848 GABRG3Q99928 467 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 CD300AQ9UGN4 299 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 NTNG1Q9Y2I2 539 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 LRRC3CA6NJW4 275 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 ZNF354AO60765 605 aaPredicted RBP18.53■□□□□ 0.56
UPF1-207ENST00000599848 OR5G3P0C626 314 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 SPI1P17947 270 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 SLC35A2P78381 396 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 HOXA4Q00056 320 aaPredicted RBP18.53■□□□□ 0.56
UPF1-207ENST00000599848 COX20Q5RI15 118 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 OTUD1Q5VV17 481 aaPredicted RBP18.53■□□□□ 0.56
UPF1-207ENST00000599848 LIPNQ5VXI9 398 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 LINC01599Q8WXQ3 324 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 RDH5Q92781 318 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 GPR84Q9NQS5 396 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 TAS2R5Q9NYW4 299 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 hADV38S2A0JD32 116 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 HRASP01112 189 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 ACOT6Q3I5F7 207 aaPredicted RBP18.53■□□□□ 0.56
UPF1-207ENST00000599848 LILRA6Q6PI73 481 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 UBAC2Q8NBM4 344 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 SLC30A7Q8NEW0 376 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 SPSB1Q96BD6 273 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 CTSFQ9UBX1 484 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 IL9P15248 144 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 RAB1AP62820 205 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 OR13C8Q8NGS7 320 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 TIMM9Q9Y5J7 89 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 TRABD2BA6NFA1 517 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 KIR2DS2P43631 304 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 ZNF385BQ569K4 471 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 OR2A1Q8NGT9 310 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 OR1F12Q8NHA8 337 aa18.53■□□□□ 0.56
UPF1-207ENST00000599848 B3GNTL1Q67FW5 361 aaPredicted RBP18.52■□□□□ 0.56
UPF1-207ENST00000599848 STRAPQ9Y3F4 350 aaKnown RBP18.52■□□□□ 0.56
UPF1-207ENST00000599848 GPR37O15354 613 aa18.52■□□□□ 0.56
UPF1-207ENST00000599848 PHLDA2Q53GA4 152 aa18.52■□□□□ 0.56
UPF1-207ENST00000599848 PPIL1Q9Y3C6 166 aa18.52■□□□□ 0.56
UPF1-207ENST00000599848 HMGN4O00479 90 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 B4GALT1P15291 398 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 TNFSF8P32971 234 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 TMPRSS3P57727 454 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 DRAM2Q6UX65 266 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 ST8SIA2Q92186 375 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 SLC29A1Q99808 456 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 ADAT1Q9BUB4 502 aaKnown RBP18.52■□□□□ 0.55
UPF1-207ENST00000599848 LHX9Q9NQ69 397 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 ZFP92A6NM28 416 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 FBXO24O75426 580 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 DAPP51397 102 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 HIST2H3PS2Q5TEC6 136 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 PFN4Q8NHR9 129 aa18.52■□□□□ 0.55
UPF1-207ENST00000599848 MMP11P24347 488 aa18.51■□□□□ 0.55
UPF1-207ENST00000599848 MDH2P40926 338 aaKnown RBP18.51■□□□□ 0.55
UPF1-207ENST00000599848 HAAOP46952 286 aa18.51■□□□□ 0.55
UPF1-207ENST00000599848 ZNF620Q6ZNG0 422 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms