RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PURGQ9UJV8 347 aaKnown RBP11.82□□□□□ -0.52
UPF1-205ENST00000598209 OAZ3Q9UMX2 235 aa11.82□□□□□ -0.52
UPF1-205ENST00000598209 TANC2Q9HCD6 1990 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 PLSCR5A0PG75 271 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 ZSCAN5BA6NJL1 495 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 TIMM8AO60220 97 aaPredicted RBP11.81□□□□□ -0.52
UPF1-205ENST00000598209 KITLGP21583 273 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 USF1P22415 310 aaPredicted RBP11.81□□□□□ -0.52
UPF1-205ENST00000598209 IGFBP5P24593 272 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 GIFP27352 417 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 LIPAP38571 399 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 TPTEP56180 551 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 CCL8P80075 99 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 KRTAP1-1Q07627 177 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 GGTLC2Q14390 218 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 TSTQ16762 297 aaKnown RBP11.81□□□□□ -0.52
UPF1-205ENST00000598209 COLCA1Q6ZS62 124 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 CXXC5Q7LFL8 322 aaKnown RBP11.81□□□□□ -0.52
UPF1-205ENST00000598209 BBS1Q8NFJ9 593 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 RDH5Q92781 318 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 SPTSSAQ969W0 71 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 SLAMF6Q96DU3 332 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 ZMYND19Q96E35 227 aaPredicted RBP11.81□□□□□ -0.52
UPF1-205ENST00000598209 PKP2Q99959 881 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 C1QTNF5Q9BXJ0 243 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 MARCH7Q9H992 704 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 CYSLTR2Q9NS75 346 aa11.81□□□□□ -0.52
UPF1-205ENST00000598209 TMEFF2Q9UIK5 374 aaPredicted RBP11.81□□□□□ -0.52
UPF1-205ENST00000598209 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 M0R135 149 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 PRODHO43272 600 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 TPD52L2O43399 206 aaKnown RBP11.8□□□□□ -0.52
UPF1-205ENST00000598209 SPRY3O43610 288 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 IGHV1-46P01743 117 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 LCATP04180 440 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 RAC2P15153 192 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 ACHEP22303 614 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 SLC2A5P22732 501 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 COL8A2P25067 703 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 EPHA2P29317 976 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 EIF2B1Q14232 305 aaKnown RBP11.8□□□□□ -0.52
UPF1-205ENST00000598209 HLXQ14774 488 aaPredicted RBP11.8□□□□□ -0.52
UPF1-205ENST00000598209 TAF13Q15543 124 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 ZMAT1Q5H9K5 638 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 SLC35D3Q5M8T2 416 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 FBXW12Q6X9E4 464 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 SHFQ7M4L6 423 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 DPY19L4Q7Z388 723 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 NAA40Q86UY6 237 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 TIGD4Q8IY51 512 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 ZNF540Q8NDQ6 660 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 ST7LQ8TDW4 575 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 YIPF5Q969M3 257 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 HAVCR1Q96D42 359 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 ZNF799Q96GE5 643 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 CIB1Q99828 191 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 COPS4Q9BT78 406 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 PRRG3Q9BZD7 231 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 MSL2Q9HCI7 577 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 CENPMQ9NSP4 180 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 DECR2Q9NUI1 292 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 ENOPH1Q9UHY7 261 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 ZANQ9Y493 2812 aa11.8□□□□□ -0.52
UPF1-205ENST00000598209 DYSFO75923 2080 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 IGHV4-61A0A0C4DH41 118 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 ZAR1LA6NP61 321 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 ZNF878C9JN71 531 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 M0R129 80 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 PRKYO43930 277 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 SELENOFO60613 162 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 ADH4P08319 380 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 OTX1P32242 354 aaPredicted RBP11.79□□□□□ -0.52
UPF1-205ENST00000598209 SLC6A9P48067 706 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 RPS7P62081 194 aaKnown RBP11.79□□□□□ -0.52
UPF1-205ENST00000598209 MRPS11P82912 194 aaKnown RBP11.79□□□□□ -0.52
UPF1-205ENST00000598209 PPP2R2BQ00005 443 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 RIN1Q13671 783 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 APOFQ13790 326 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 TMEM249Q2WGJ8 235 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 FAM209AQ5JX71 171 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 SLX4IPQ5VYV7 408 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 C12orf73Q69YU5 71 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 SPATC1Q76KD6 591 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 DIRC2Q96SL1 478 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 KCNJ15Q99712 375 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 RBM4BQ9BQ04 359 aaKnown RBP11.79□□□□□ -0.52
UPF1-205ENST00000598209 ABHD6Q9BV23 337 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 OSBPL10Q9BXB5 764 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 CHODLQ9H9P2 273 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 SAP30LQ9HAJ7 183 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 ZDHHC8Q9ULC8 765 aa11.79□□□□□ -0.52
UPF1-205ENST00000598209 CDC14BO60729 498 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 RP2O75695 350 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 NAA10P41227 235 aaPredicted RBP11.78□□□□□ -0.52
UPF1-205ENST00000598209 PRKXP51817 358 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 CDK5R2Q13319 367 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 OR2T2Q6IF00 324 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 DRAM2Q6UX65 266 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 Q6ZR03 302 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms