RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 PPP1R3DO95685 299 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 FABP3P05413 133 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 WNT2P09544 360 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 RRM2P31350 389 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 CD80P33681 288 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 GSSP48637 474 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 SCRN3Q0VDG4 424 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 RFX4Q33E94 735 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 LEG1Q6P5S2 330 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 SMARCD3Q6STE5 483 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 LRRN1Q6UXK5 716 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 CYP2R1Q6VVX0 501 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 Q6ZR03 302 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 VASH1Q7L8A9 365 aaPredicted RBP10.5□□□□□ -0.73
TRIM28-212ENST00000597995 ZDHHC21Q8IVQ6 265 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 OR52E2Q8NGJ4 325 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 ITLN1Q8WWA0 313 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 SLC7A6Q92536 515 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 CMBLQ96DG6 245 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 MMP24Q9Y5R2 645 aa10.5□□□□□ -0.73
TRIM28-212ENST00000597995 TGP01266 2768 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 CEACAM18A8MTB9 384 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 B2RBV5 119 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 KHDRBS3O75525 346 aaKnown RBP10.49□□□□□ -0.73
TRIM28-212ENST00000597995 FSTL3O95633 263 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 PLATP00750 562 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 FPR3P25089 353 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 HMGA2P52926 109 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 SMIM11AP58511 58 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 MXRA7P84157 204 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 MS4A2Q01362 244 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 PAX2Q02962 417 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 HNRNPA0Q13151 305 aaKnown RBP10.49□□□□□ -0.73
TRIM28-212ENST00000597995 MEP1BQ16820 701 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 SPATS1Q496A3 300 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 CCDC92Q53HC0 331 aaPredicted RBP10.49□□□□□ -0.73
TRIM28-212ENST00000597995 SLC27A4Q6P1M0 643 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 C1orf94Q6P1W5 598 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 PGBD2Q6P3X8 592 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 C16orf87Q6PH81 154 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 BTNL3Q6UXE8 466 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 ADCK1Q86TW2 530 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 GLB1L2Q8IW92 636 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 PARP8Q8N3A8 854 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 PTP4A1Q93096 173 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 UPRTQ96BW1 309 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 NSL1Q96IY1 281 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 ERMAPQ96PL5 475 aaPredicted RBP10.49□□□□□ -0.73
TRIM28-212ENST00000597995 SSBP3Q9BWW4 388 aaPredicted RBP10.49□□□□□ -0.73
TRIM28-212ENST00000597995 RERGLQ9H628 205 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 ACTR3BQ9P1U1 418 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 STARD10Q9Y365 291 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 DOCK11Q5JSL3 2073 aa10.49□□□□□ -0.73
TRIM28-212ENST00000597995 IGLV1-36A0A0B4J1U3 117 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 A0A1B0GUS0 222 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 OR6C6A6NF89 314 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 J3QW42 95 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 ARPC3O15145 178 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 RER1O15258 196 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 SGCEO43556 437 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 OR10H3O60404 316 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 DOK2O60496 412 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 FAM107AO95990 144 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 IGHV4-38-2P0DP08 117 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 RAC2P15153 192 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 HIST1H1CP16403 213 aaKnown RBP10.48□□□□□ -0.73
TRIM28-212ENST00000597995 RBMXP38159 391 aaKnown RBP10.48□□□□□ -0.73
TRIM28-212ENST00000597995 MAGEA2P43356 314 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 HTR5AP47898 357 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 RPS6KA3P51812 740 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 LSM6P62312 80 aaKnown RBP10.48□□□□□ -0.73
TRIM28-212ENST00000597995 AQP6Q13520 282 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 KCNMB1Q16558 191 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 ZNF770Q6IQ21 691 aaPredicted RBP10.48□□□□□ -0.73
TRIM28-212ENST00000597995 OR6V1Q8N148 313 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 OR4C15Q8NGM1 316 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 FANK1Q8TC84 345 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 RAB40AQ8WXH6 277 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 MCUR1Q96AQ8 359 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 TMIGD2Q96BF3 282 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 PLEKHA8Q96JA3 519 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 NMNAT3Q96T66 252 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 BTBD10Q9BSF8 475 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 NDEL1Q9GZM8 345 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 PRDM13Q9H4Q3 707 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 GCM1Q9NP62 436 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 NDE1Q9NXR1 346 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 VNN3Q9NY84 501 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 ASH2LQ9UBL3 628 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 MIOXQ9UGB7 285 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 B9D1Q9UPM9 204 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 LYVE1Q9Y5Y7 322 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 LHFPL6Q9Y693 200 aa10.48□□□□□ -0.73
TRIM28-212ENST00000597995 IGHV2-70DA0A0C4DH43 119 aa10.47□□□□□ -0.73
TRIM28-212ENST00000597995 DBHP09172 617 aa10.47□□□□□ -0.73
TRIM28-212ENST00000597995 MDKP21741 143 aaPredicted RBP10.47□□□□□ -0.73
TRIM28-212ENST00000597995 SLC6A6P31641 620 aa10.47□□□□□ -0.73
TRIM28-212ENST00000597995 MMP16P51512 607 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms