RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 IQCF6A8MYZ5 107 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 NDUFB2O95178 105 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 KNG1P01042 644 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 CTLA4P16410 223 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 CALB2P22676 271 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 CRABP1P29762 137 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 GPR4P46093 362 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 YAP1P46937 504 aaKnown RBP14.23□□□□□ -0.13
PNKP-210ENST00000597965 PITPNBP48739 271 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 NPY4RP50391 375 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 KLF10Q13118 480 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 KRR1Q13601 381 aaKnown RBP14.23□□□□□ -0.13
PNKP-210ENST00000597965 ZNF404Q494X3 552 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 GPR157Q5UAW9 335 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 CD276Q5ZPR3 534 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 OR2T2Q6IF00 324 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 FKBP9P1Q75LS8 142 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 CELF2-AS1Q8N7Q2 184 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 OR10AD1Q8NGE0 317 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 OR11L1Q8NGX0 322 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 COQ7Q99807 217 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 SLC30A2Q9BRI3 323 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 TMEM246Q9BRR3 403 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 SYT4Q9H2B2 425 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 RERGLQ9H628 205 aa14.23□□□□□ -0.13
PNKP-210ENST00000597965 SRRM5B3KS81 715 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 GSTA4O15217 222 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 ZNF682O95780 498 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 GPANK1O95872 356 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 CYB5R3P00387 301 aaPredicted RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 LIPFP07098 398 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 RPS6KA3P51812 740 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 RPL15P61313 204 aaKnown RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 HLXQ14774 488 aaPredicted RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 KCNMB1Q16558 191 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 CCDC92Q53HC0 331 aaPredicted RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 DCDC5Q6ZRR9 648 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 TMEM86BQ8N661 226 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 OR10S1Q8NGN2 331 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 ZNF420Q8TAQ5 688 aaPredicted RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 FAM71F1Q96KD3 344 aaPredicted RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 GPX7Q96SL4 187 aaPredicted RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 NUDT16L1Q9BRJ7 211 aaKnown RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 PRDM13Q9H4Q3 707 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 NRIP3Q9NQ35 241 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 PTTG3PQ9NZH4 202 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 VSX1Q9NZR4 365 aaPredicted RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 TAGLN3Q9UI15 199 aa14.22□□□□□ -0.13
PNKP-210ENST00000597965 COA3Q9Y2R0 106 aaPredicted RBP14.22□□□□□ -0.13
PNKP-210ENST00000597965 TRRAPQ9Y4A5 3859 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 LOC100653049A0A140TA62 436 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 J3KTA2 159 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 CDC42EP2O14613 210 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 FFAR1O14842 300 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 SLC22A2O15244 555 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 RER1O15258 196 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 HOXA3O43365 443 aaPredicted RBP14.21□□□□□ -0.13
PNKP-210ENST00000597965 ENSAO43768 121 aaKnown RBP14.21□□□□□ -0.13
PNKP-210ENST00000597965 KRT34O76011 436 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 MDKP21741 143 aaPredicted RBP14.21□□□□□ -0.13
PNKP-210ENST00000597965 PRDX6P30041 224 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 GATA4P43694 442 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 RASSF2P50749 326 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 ECH1Q13011 328 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 MALLQ13021 153 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 VTCN1Q7Z7D3 282 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 MOGAT3Q86VF5 341 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 POU5F2Q8N7G0 328 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 SLC7A6Q92536 515 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 DACT3Q96B18 629 aaPredicted RBP14.21□□□□□ -0.13
PNKP-210ENST00000597965 SLC22A4Q9H015 551 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 TRIM36Q9NQ86 728 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 FAM32AQ9Y421 112 aaKnown RBP14.21□□□□□ -0.13
PNKP-210ENST00000597965 SNX13Q9Y5W8 968 aa14.21□□□□□ -0.13
PNKP-210ENST00000597965 IGHV3OR16-10A0A075B7F0 116 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 CXCR6O00574 342 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 FPR3P25089 353 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 ERFP50548 548 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 RAD23AP54725 363 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 PDCD1Q15116 288 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 MIDNQ504T8 468 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 TBPL2Q6SJ96 375 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 DPY19L2P2Q6ZN68 376 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 CBLL1Q75N03 491 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 BHLHE23Q8NDY6 225 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 Q8TCH9 128 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 NUAK2Q9H093 628 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 SIGLEC7Q9Y286 467 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 POMT1Q9Y6A1 747 aa14.2□□□□□ -0.14
PNKP-210ENST00000597965 A0A1B0GWJ7 208 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 A0A1W2PRQ8 180 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 FAM181BA6NEQ2 426 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 F5H5P2 479 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 M0QZ24 198 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 TIMM23O14925 209 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 ZNF205O95201 554 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 DBHP09172 617 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 CENPAP49450 140 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 HNRNPA0Q13151 305 aaKnown RBP14.19□□□□□ -0.14
PNKP-210ENST00000597965 DGCR6Q14129 220 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms