RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, humanhuman

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-210ENST00000597641 NEIL1Q96FI4 390 aaPredicted RBP12.61□□□□□ -0.39
PRKD2-210ENST00000597641 NUDT16L1Q9BRJ7 211 aaKnown RBP12.61□□□□□ -0.39
PRKD2-210ENST00000597641 SIKE1Q9BRV8 207 aa12.61□□□□□ -0.39
PRKD2-210ENST00000597641 PRDM13Q9H4Q3 707 aa12.61□□□□□ -0.39
PRKD2-210ENST00000597641 MARCH7Q9H992 704 aa12.61□□□□□ -0.39
PRKD2-210ENST00000597641 NRIP3Q9NQ35 241 aa12.61□□□□□ -0.39
PRKD2-210ENST00000597641 ARMCX1Q9P291 453 aa12.61□□□□□ -0.39
PRKD2-210ENST00000597641 IER3IP1Q9Y5U9 82 aa12.61□□□□□ -0.39
PRKD2-210ENST00000597641 C5orf63A6NC05 138 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 IQCF6A8MYZ5 107 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 CXCR6O00574 342 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 NME4O00746 187 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 XKRYO14609 159 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 SFTPBP07988 381 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 SDHAP31040 664 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 OMPP47874 163 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 MTNR1AP48039 350 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 PITPNBP48739 271 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 LIPEQ05469 1076 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 MPPED2Q15777 294 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 KCNMB1Q16558 191 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 IFI44LQ53G44 452 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 CLEC12AQ5QGZ9 265 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 PRAMEF6Q5VXH4 476 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 WDR25Q64LD2 544 aaPredicted RBP12.6□□□□□ -0.39
PRKD2-210ENST00000597641 CFAP77Q6ZQR2 320 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 COLCA1Q6ZS62 124 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 RHOUQ7L0Q8 258 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 WFDC12Q8WWY7 111 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 GPX7Q96SL4 187 aaPredicted RBP12.6□□□□□ -0.39
PRKD2-210ENST00000597641 FGFR1OP2Q9NVK5 253 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 CTSZQ9UBR2 303 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 MIOXQ9UGB7 285 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 TMCC3Q9ULS5 477 aa12.6□□□□□ -0.39
PRKD2-210ENST00000597641 IGLV1-36A0A0B4J1U3 117 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 TRBV4-1A0A0J9YWV2 114 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 AHCYL1O43865 530 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 SASH3O75995 380 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 DIRAS1O95057 198 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 SERPINA1P01009 418 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 NCK1P16333 377 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 RAD23AP54725 363 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 ZNF181Q2M3W8 571 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 BTNL3Q6UXE8 466 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 LINC00346Q8IVM7 164 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 LZICQ8WZA0 190 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 APOBEC3DQ96AK3 386 aaPredicted RBP12.59□□□□□ -0.39
PRKD2-210ENST00000597641 ZNF582Q96NG8 517 aaPredicted RBP12.59□□□□□ -0.39
PRKD2-210ENST00000597641 CHIAQ9BZP6 476 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 C1RLQ9NZP8 487 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 RPS6KA6Q9UK32 745 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 MMP24Q9Y5R2 645 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 ENPP4Q9Y6X5 453 aa12.59□□□□□ -0.39
PRKD2-210ENST00000597641 SRRM5B3KS81 715 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 FAM20BO75063 409 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 NDUFB2O95178 105 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 ACSM4P0C7M7 580 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 PSMB10P40306 273 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 SRP9P49458 86 aaKnown RBP12.58□□□□□ -0.4
PRKD2-210ENST00000597641 GSK3BP49841 420 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 SLC7A2P52569 658 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 GK2Q14410 553 aaPredicted RBP12.58□□□□□ -0.4
PRKD2-210ENST00000597641 C8orf82Q6P1X6 216 aaPredicted RBP12.58□□□□□ -0.4
PRKD2-210ENST00000597641 FIP1L1Q6UN15 594 aaKnown RBP12.58□□□□□ -0.4
PRKD2-210ENST00000597641 Q6YL49 198 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 OR6V1Q8N148 313 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 FAM86B1Q8N7N1 296 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 OR8B3Q8NGG8 313 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 RSRC1Q96IZ7 334 aaKnown RBP12.58□□□□□ -0.4
PRKD2-210ENST00000597641 COG8Q96MW5 612 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 OR8B2Q96RD0 313 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 TBX15Q96SF7 602 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 COQ7Q99807 217 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 FUZQ9BT04 418 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 SMURF1Q9HCE7 757 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 PNRC2Q9NPJ4 139 aaKnown RBP12.58□□□□□ -0.4
PRKD2-210ENST00000597641 UFSP2Q9NUQ7 469 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 GID8Q9NWU2 228 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 ATPIF1Q9UII2 106 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 DNAH3Q8TD57 4116 aa12.58□□□□□ -0.4
PRKD2-210ENST00000597641 IFNL4K9M1U5 179 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 TNFRSF13BO14836 293 aaPredicted RBP12.57□□□□□ -0.4
PRKD2-210ENST00000597641 PPP1R3DO95685 299 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 TXNDC12O95881 172 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 MELTFP08582 738 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 PSKH1P11801 424 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 MMP9P14780 707 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 FPR3P25089 353 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 IFNA8P32881 189 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 GATA4P43694 442 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 CENPAP49450 140 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 RGS6P49758 472 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 COX10Q12887 443 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 GPR139Q6DWJ6 353 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 FGFRL1Q8N441 504 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 Q8TCH9 128 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 PCGF1Q9BSM1 259 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 RASSF4Q9H2L5 321 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 FN3KQ9H479 309 aa12.57□□□□□ -0.4
PRKD2-210ENST00000597641 SRA1Q9HD15 236 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms