RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TMEM155Q4W5P6 130 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 CLEC12AQ5QGZ9 265 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 ZNF362Q5T0B9 420 aaPredicted RBP15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 SLC35F1Q5T1Q4 408 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 OR2T2Q6IF00 324 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 SHQ1Q6PI26 577 aaKnown RBP15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 CFAP77Q6ZQR2 320 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 LNX2Q8N448 690 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 CCDC197Q8NCU1 140 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 OR4M2Q8NGB6 313 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 OR13G1Q8NGZ3 307 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 ITLN1Q8WWA0 313 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 ZNF582Q96NG8 517 aaPredicted RBP15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 PITX2Q99697 317 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 ATF6BQ99941 703 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 REPIN1Q9BWE0 567 aaKnown RBP15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 TMPRSS13Q9BYE2 586 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 C1orf21Q9H246 121 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 FN3KQ9H479 309 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 PNRC2Q9NPJ4 139 aaKnown RBP15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 MRPL22Q9NWU5 206 aaKnown RBP15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 PRPF19Q9UMS4 504 aaKnown RBP15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 PPP1R3CQ9UQK1 317 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 DYSFO75923 2080 aa15.13■□□□□ 0.01
CHMP2A-203ENST00000597209 A0A1B0GWJ7 208 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 HLA-DQA2P01906 255 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 SELEP16581 610 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 SRSF2Q01130 221 aaKnown RBP15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 MS4A2Q01362 244 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 FAM98BQ52LJ0 330 aaKnown RBP15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 OR2T5Q6IEZ7 315 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 C1orf229Q6ZS94 237 aaPredicted RBP15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 LRRC28Q86X40 367 aaPredicted RBP15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 LINC00346Q8IVM7 164 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 OR5AS1Q8N127 324 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 SPICQ8N5J4 248 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 OR2T4Q8NH00 348 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 OR2T29Q8NH02 315 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 ST7LQ8TDW4 575 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 OR2V2Q96R30 315 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 SIGLEC11Q96RL6 698 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 SLC30A2Q9BRI3 323 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 DGCR6LQ9BY27 220 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 PLA2G12AQ9BZM1 189 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 DCAF16Q9NXF7 216 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 BAIAP2Q9UQB8 552 aa15.12■□□□□ 0.01
CHMP2A-203ENST00000597209 FOXH1O75593 365 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 AVPP01185 164 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 SBK2P0C263 348 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 ZNF823P16415 610 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 CPT2P23786 658 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 DBPQ10586 325 aaPredicted RBP15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 TRAP1Q12931 704 aaKnown RBP15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 MICAQ29983 383 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 DCAF12L2Q5VW00 463 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 C1QL2Q7Z5L3 287 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 ATG16L2Q8NAA4 619 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 AQP11Q8NBQ7 271 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 OR8D4Q8NGM9 314 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 ASB9Q96DX5 294 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 MEGF10Q96KG7 1140 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 HCAR1Q9BXC0 346 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 REEP1Q9H902 201 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 PATZ1Q9HBE1 687 aaKnown RBP15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 GCM1Q9NP62 436 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 UBAP1Q9NZ09 502 aa15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 POLR3KQ9Y2Y1 108 aaPredicted RBP15.11■□□□□ 0.01
CHMP2A-203ENST00000597209 F5H5K5 113 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 TMEM178BH3BS89 294 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 PYCR1P32322 319 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 SRP9P49458 86 aaKnown RBP15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 TPTEP56180 551 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 BTG1P62324 171 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 CD300LDQ6UXZ3 194 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 KLHL36Q8N4N3 616 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 CYB561A3Q8NBI2 242 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 SLC37A3Q8NCC5 494 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 PROKR2Q8NFJ6 384 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 ZFAND2BQ8WV99 257 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 MAP6Q96JE9 813 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 RBM4Q9BWF3 364 aaKnown RBP15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 TSSK6Q9BXA6 273 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 DDX28Q9NUL7 540 aaKnown RBP15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 TBC1D23Q9NUY8 699 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 TMEM100Q9NV29 134 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 VNN3Q9NY84 501 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 TAS2R1Q9NYW7 299 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 PCDHB10Q9UN67 800 aa15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 SAMHD1Q9Y3Z3 626 aaKnown RBP15.1■□□□□ 0.01
CHMP2A-203ENST00000597209 LOC105371242A0A075B767 164 aa15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 MLNRO43193 412 aa15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 FSTL3O95633 263 aa15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 RAP2AP10114 183 aa15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 OTX1P32242 354 aaPredicted RBP15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 MMP16P51512 607 aa15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 SLC25A1P53007 311 aa15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 PPP1R8Q12972 351 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 MALLQ13021 153 aa15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 GK2Q14410 553 aaPredicted RBP15.09■□□□□ 0.01
CHMP2A-203ENST00000597209 PCK2Q16822 640 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms