RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 MDKP21741 143 aaPredicted RBP13.43□□□□□ -0.26
LIM2-202ENST00000596399 GNB2P62879 340 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 HIST1H3AP68431 136 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 DGCR6Q14129 220 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 HIST2H3PS2Q5TEC6 136 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 GPR139Q6DWJ6 353 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 SLC27A4Q6P1M0 643 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 BRD3OSQ6XYD6 125 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 HIST2H3AQ71DI3 136 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 ARPINQ7Z6K5 226 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 CYP4Z1Q86W10 505 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 LINC00346Q8IVM7 164 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 SLC25A28Q96A46 364 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 APOBEC3DQ96AK3 386 aaPredicted RBP13.43□□□□□ -0.26
LIM2-202ENST00000596399 CDADC1Q9BWV3 514 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 ANKRD19PQ9H560 264 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 ZNF696Q9H7X3 374 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 B9D1Q9UPM9 204 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 AP3M1Q9Y2T2 418 aa13.43□□□□□ -0.26
LIM2-202ENST00000596399 IGLV1-36A0A0B4J1U3 117 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 TXNDC12O95881 172 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 PLATP00750 562 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 ANOS1P23352 680 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 SRP9P49458 86 aaKnown RBP13.42□□□□□ -0.26
LIM2-202ENST00000596399 RGS6P49758 472 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 SRSF4Q08170 494 aaKnown RBP13.42□□□□□ -0.26
LIM2-202ENST00000596399 MAB21L1Q13394 359 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 ZNF404Q494X3 552 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 PRAMEF6Q5VXH4 476 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 BTNL3Q6UXE8 466 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 DPY19L2P2Q6ZN68 376 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 CFAP77Q6ZQR2 320 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 ADCK1Q86TW2 530 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 OR6V1Q8N148 313 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 GJC3Q8NFK1 279 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 OR5L1Q8NGL2 311 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 RAB40AQ8WXH6 277 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 UPRTQ96BW1 309 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 C7orf34Q96L11 122 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 ERMAPQ96PL5 475 aaPredicted RBP13.42□□□□□ -0.26
LIM2-202ENST00000596399 NMNAT3Q96T66 252 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 HOPXQ9BPY8 73 aaPredicted RBP13.42□□□□□ -0.26
LIM2-202ENST00000596399 KCTD14Q9BQ13 255 aaPredicted RBP13.42□□□□□ -0.26
LIM2-202ENST00000596399 FN3KQ9H479 309 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 TNFRSF19Q9NS68 423 aa13.42□□□□□ -0.26
LIM2-202ENST00000596399 ARGLU1Q9NWB6 273 aaPredicted RBP13.42□□□□□ -0.26
LIM2-202ENST00000596399 IQCF6A8MYZ5 107 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 F5H5K5 113 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 SLC22A2O15244 555 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 FPR3P25089 353 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 PITPNBP48739 271 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 NUDT2P50583 147 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 GK2Q14410 553 aaPredicted RBP13.41□□□□□ -0.26
LIM2-202ENST00000596399 MPPED2Q15777 294 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 DEFB112Q30KQ8 113 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 LRRN1Q6UXK5 716 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 NEIL1Q96FI4 390 aaPredicted RBP13.41□□□□□ -0.26
LIM2-202ENST00000596399 COQ7Q99807 217 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 NUDT16L1Q9BRJ7 211 aaKnown RBP13.41□□□□□ -0.26
LIM2-202ENST00000596399 FUZQ9BT04 418 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 NDEL1Q9GZM8 345 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 HDHD2Q9H0R4 259 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 ZMAT3Q9HA38 289 aaKnown RBP13.41□□□□□ -0.26
LIM2-202ENST00000596399 UFSP2Q9NUQ7 469 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 TMEM100Q9NV29 134 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 MIOXQ9UGB7 285 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 ATPIF1Q9UII2 106 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 AURKCQ9UQB9 309 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 V9GYQ6 96 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 TGP01266 2768 aa13.41□□□□□ -0.26
LIM2-202ENST00000596399 KIR2DS1A0A191URI9 304 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 CLDN34H7C241 214 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 J3QW42 95 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 HOXA3O43365 443 aaPredicted RBP13.4□□□□□ -0.26
LIM2-202ENST00000596399 ACSM4P0C7M7 580 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 HIST1H1CP16403 213 aaKnown RBP13.4□□□□□ -0.26
LIM2-202ENST00000596399 RHCEP18577 417 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 MDH1P40925 334 aaKnown RBP13.4□□□□□ -0.26
LIM2-202ENST00000596399 RPS6KA3P51812 740 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 FGF12P61328 243 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 COX10Q12887 443 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 KRTAP27-1Q3LI81 207 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 SLC18B1Q6NT16 456 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 SMARCD3Q6STE5 483 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 TREML4Q6UXN2 200 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 ZNF841Q6ZN19 808 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 COLCA1Q6ZS62 124 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 C9orf139Q6ZV77 190 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 SPATC1Q76KD6 591 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 FITM2Q8N6M3 262 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 RNF148Q8N7C7 305 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 SLC26A10Q8NG04 563 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 OR10S1Q8NGN2 331 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 OR4K13Q8NH42 304 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 SLCO4A1Q96BD0 722 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 EFCAB1Q9HAE3 211 aa13.4□□□□□ -0.26
LIM2-202ENST00000596399 FAM32AQ9Y421 112 aaKnown RBP13.4□□□□□ -0.26
LIM2-202ENST00000596399 VWFP04275 2813 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 A0A1B0GWJ7 208 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 C5orf63A6NC05 138 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms