RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TSTQ16762 297 aaKnown RBP9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 PCGF3Q3KNV8 242 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 TEX30Q5JUR7 227 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 C6orf52Q5T4I8 152 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 FBXW12Q6X9E4 464 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 DCXRQ7Z4W1 244 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 AMIGO2Q86SJ2 522 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 PARP8Q8N3A8 854 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 OR6K6Q8NGW6 343 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 ST7LQ8TDW4 575 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 LRTOMTQ8WZ04 291 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 APOBEC3DQ96AK3 386 aaPredicted RBP9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 HAVCR1Q96D42 359 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 CMBLQ96DG6 245 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 CDADC1Q9BWV3 514 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 GABARAPL1Q9H0R8 117 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 MARCH7Q9H992 704 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 CHODLQ9H9P2 273 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF556Q9HAH1 456 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 PAPOLBQ9NRJ5 636 aaKnown RBP9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF275Q9NSD4 429 aaPredicted RBP9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 PTTG3PQ9NZH4 202 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 PURGQ9UJV8 347 aaKnown RBP9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 CACNG2Q9Y698 323 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 PLSCR5A0PG75 271 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 C5orf63A6NC05 138 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 F5H5K5 113 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF593O00488 134 aaPredicted RBP9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 TIMM8AO60220 97 aaPredicted RBP9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 CDC14BO60729 498 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 GLCEO94923 617 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 SPARCP09486 303 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF16P17020 682 aaPredicted RBP9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 TUBG1P23258 451 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 FASP25445 335 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 EPHA2P29317 976 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 RBMXP38159 391 aaKnown RBP9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 CRYBB2P43320 205 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 CRISP1P54107 249 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 PRSS12P56730 875 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 ECH1Q13011 328 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 CDK5R2Q13319 367 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 MOGQ16653 247 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 KDM4DQ6B0I6 523 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 PLBD1Q6P4A8 553 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 CCDC121Q6ZUS5 278 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 USP51Q70EK9 711 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 TIGD4Q8IY51 512 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF540Q8NDQ6 660 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 BBS1Q8NFJ9 593 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 DNAJC9Q8WXX5 260 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 MSI2Q96DH6 328 aaKnown RBP9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 COG8Q96MW5 612 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 AMELYQ99218 206 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 TUBG2Q9NRH3 451 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 KIF17Q9P2E2 1029 aa9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 CGGBP1Q9UFW8 167 aaPredicted RBP9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 TMEFF2Q9UIK5 374 aaPredicted RBP9.33□□□□□ -0.92
SHKBP1-206ENST00000595523 IGHV1-69-2A0A0G2JMI3 117 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 PRR23D1E9PI22 279 aaPredicted RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 G3V2T6 193 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 H3BNX3 289 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 M0R135 149 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 TLX2O43763 284 aaPredicted RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 CIB2O75838 187 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 MT-ND5P03915 603 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 CD55P08174 381 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 PRR23D2P0DMB1 279 aaPredicted RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 RAC2P15153 192 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 SLC2A5P22732 501 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 ACTR3P61158 418 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 GK2Q14410 553 aaPredicted RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 KPNB1Q14974 876 aaKnown RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 PTGES3Q15185 160 aaKnown RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 FAM209AQ5JX71 171 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 OR2T2Q6IF00 324 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 DPY19L4Q7Z388 723 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 HIPK1Q86Z02 1210 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 ERI1Q8IV48 349 aaKnown RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 CPOQ8IVL8 374 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 OR5AS1Q8N127 324 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 PYDC1Q8WXC3 89 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 OTULINQ96BN8 352 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 SLAMF6Q96DU3 332 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 ZMYND19Q96E35 227 aaPredicted RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 ZNF799Q96GE5 643 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 INTS14Q96SY0 518 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 OR51V1Q9H2C8 321 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 SEMA6AQ9H2E6 1030 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 SAP30LQ9HAJ7 183 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 YAE1D1Q9NRH1 226 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 CYSLTR2Q9NS75 346 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 ZDHHC8Q9ULC8 765 aa9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 FBN1P35555 2871 aaKnown RBP9.32□□□□□ -0.92
SHKBP1-206ENST00000595523 M0R129 80 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 PRODHO43272 600 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 SELENOFO60613 162 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 CRLF1O75462 422 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 HMGN1P05114 100 aa9.31□□□□□ -0.92
SHKBP1-206ENST00000595523 FCGR1AP12314 374 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms