RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 VENTXO95231 258 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 RENP00797 406 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 F13BP05160 661 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 GRPRP30550 384 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 S100A5P33763 92 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
SCAF1-202ENST00000595242 RPL27P61353 136 aaKnown RBP11.16□□□□□ -0.62
SCAF1-202ENST00000595242 FOXF1Q12946 379 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF684Q5T5D7 378 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 C16orf87Q6PH81 154 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 SSX6Q7RTT6 188 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 SLC16A9Q7RTY1 509 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 GGNQ86UU5 652 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 ADPRHL1Q8NDY3 354 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 OR2T4Q8NH00 348 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 POC1BQ8TC44 478 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 HAVCR2Q8TDQ0 301 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 CHPT1Q8WUD6 406 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 GCDHQ92947 438 aaPredicted RBP11.16□□□□□ -0.62
SCAF1-202ENST00000595242 DDIT4LQ96D03 193 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 C4orf36Q96KX1 117 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 PGLYRP3Q96LB9 341 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 TBX5Q99593 518 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 ALG12Q9BV10 488 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 C6orf62Q9GZU0 229 aaPredicted RBP11.16□□□□□ -0.62
SCAF1-202ENST00000595242 NUAK2Q9H093 628 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 TXNIPQ9H3M7 391 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 VSX1Q9NZR4 365 aaPredicted RBP11.16□□□□□ -0.62
SCAF1-202ENST00000595242 MED11Q9P086 117 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 FKBP7Q9Y680 259 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 SIRT4Q9Y6E7 314 aaPredicted RBP11.16□□□□□ -0.62
SCAF1-202ENST00000595242 PNMA8CA0A1B0GUJ8 204 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 VWC2LB2RUY7 222 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 H7C417 338 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 GMFGO60234 142 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 LY6HO94772 140 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 CDRT1O95170 752 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 CFL1P23528 166 aaKnown RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 FKBP2P26885 142 aaKnown RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 AGTR1P30556 359 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 TGM4P49221 684 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF41P51814 821 aaPredicted RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 EFNA4P52798 201 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF239Q16600 458 aaKnown RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 CCDC58Q4VC31 144 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 FAM205BPQ63HN1 556 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 TIGD4Q8IY51 512 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 MUC15Q8N387 334 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 MINDY2Q8NBR6 621 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF417Q8TAU3 575 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 TMEM203Q969S6 136 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 DCLRE1CQ96SD1 692 aaKnown RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF587Q96SQ5 575 aaPredicted RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 OR11A1Q9GZK7 315 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 KCNN2Q9H2S1 579 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 RPRD1BQ9NQG5 326 aaKnown RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 SNTG1Q9NSN8 517 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 MCTS1Q9ULC4 181 aaKnown RBP11.15□□□□□ -0.62
SCAF1-202ENST00000595242 COPS3Q9UNS2 423 aa11.15□□□□□ -0.62
SCAF1-202ENST00000595242 A0A087WZY1 265 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 A0A0A6YYJ9 748 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 TMEM89A2RUT3 159 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 E7EQL1 145 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 E9PI62 339 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 SELENOFO60613 162 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 SDC2P34741 201 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 NAA10P41227 235 aaPredicted RBP11.14□□□□□ -0.63
SCAF1-202ENST00000595242 NR4A2P43354 598 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 MTNR1BP49286 362 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 BLVRAP53004 296 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 OR12D2P58182 307 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 DBPQ10586 325 aaPredicted RBP11.14□□□□□ -0.63
SCAF1-202ENST00000595242 P2RY6Q15077 328 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 CDK5R1Q15078 307 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 RPL22L1Q6P5R6 122 aaKnown RBP11.14□□□□□ -0.63
SCAF1-202ENST00000595242 KCTD20Q7Z5Y7 419 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 PXKQ7Z7A4 578 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 FBXL14Q8N1E6 418 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 MS4A15Q8N5U1 240 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 SYT14Q8NB59 555 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 OR10D3Q8NH80 312 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 SLC25A43Q8WUT9 341 aaPredicted RBP11.14□□□□□ -0.63
SCAF1-202ENST00000595242 SMIM19Q96E16 107 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 PELI1Q96FA3 418 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 RADILQ96JH8 1075 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 NPAS1Q99742 590 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 DHRS9Q9BPW9 319 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 USB1Q9BQ65 265 aaKnown RBP11.14□□□□□ -0.63
SCAF1-202ENST00000595242 TMED9Q9BVK6 235 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 MROQ9BYG7 248 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 PTGES2Q9H7Z7 377 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 TRAPPC4Q9Y296 219 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 UGT2A1Q9Y4X1 527 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 VWFP04275 2813 aa11.14□□□□□ -0.63
SCAF1-202ENST00000595242 CMYA5Q8N3K9 4069 aa11.13□□□□□ -0.63
SCAF1-202ENST00000595242 IGLV1-36A0A0B4J1U3 117 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms