RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 RBM4BQ9BQ04 359 aaKnown RBP18.7■□□□□ 0.58
HOMER3-206ENST00000594439 C1QTNF5Q9BXJ0 243 aa18.7■□□□□ 0.58
HOMER3-206ENST00000594439 NDUFS8O00217 210 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 PRKYO43930 277 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 OTX1P32242 354 aaPredicted RBP18.69■□□□□ 0.58
HOMER3-206ENST00000594439 MAGEB1P43366 347 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 EFNB1P98172 346 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 SLC35D3Q5M8T2 416 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 DPY19L4Q7Z388 723 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 NAA40Q86UY6 237 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 HAVCR1Q96D42 359 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 CMBLQ96DG6 245 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 GABARAPL3Q9BY60 117 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 NKIRAS2Q9NYR9 191 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 PTTG3PQ9NZH4 202 aa18.69■□□□□ 0.58
HOMER3-206ENST00000594439 PURGQ9UJV8 347 aaKnown RBP18.69■□□□□ 0.58
HOMER3-206ENST00000594439 ZSCAN5BA6NJL1 495 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 LYNX1G3V0Z9 82 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 M0R129 80 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 SELENOFO60613 162 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 LY6G6DO95868 133 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 MT-ND5P03915 603 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 LYNX1P0DP58 116 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 KITLGP21583 273 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 POLR2IP36954 125 aaKnown RBP18.68■□□□□ 0.58
HOMER3-206ENST00000594439 ZNF81P51508 661 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 TPTEP56180 551 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 EIF2B1Q14232 305 aaKnown RBP18.68■□□□□ 0.58
HOMER3-206ENST00000594439 PCGF3Q3KNV8 242 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 FBXW12Q6X9E4 464 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 SHFQ7M4L6 423 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 OR5L1Q8NGL2 311 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 SPTSSAQ969W0 71 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 PIMREGQ9BSJ6 248 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 PRRG3Q9BZD7 231 aa18.68■□□□□ 0.58
HOMER3-206ENST00000594439 CGGBP1Q9UFW8 167 aaPredicted RBP18.68■□□□□ 0.58
HOMER3-206ENST00000594439 YLPM1P49750 1951 aaKnown RBP18.68■□□□□ 0.58
HOMER3-206ENST00000594439 CCDC182A6NF36 153 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 M0R135 149 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 TIMM8AO60220 97 aaPredicted RBP18.67■□□□□ 0.58
HOMER3-206ENST00000594439 ALPLP05186 524 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 RAC2P15153 192 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 GIFP27352 417 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 APOFQ13790 326 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 HLXQ14774 488 aaPredicted RBP18.67■□□□□ 0.58
HOMER3-206ENST00000594439 CLEC9AQ6UXN8 241 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 TCEANCQ8N8B7 351 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 ZNF799Q96GE5 643 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 AMELYQ99218 206 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 COPS4Q9BT78 406 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 ABHD6Q9BV23 337 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 RIBC2Q9H4K1 309 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 CYSLTR2Q9NS75 346 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 CENPMQ9NSP4 180 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 USE1Q9NZ43 259 aa18.67■□□□□ 0.58
HOMER3-206ENST00000594439 CSPG4Q6UVK1 2322 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 PLSCR5A0PG75 271 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 ZNF878C9JN71 531 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 EI24O14681 340 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 IGHV1-46P01743 117 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 LCATP04180 440 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 ADH4P08319 380 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 COL8A2P25067 703 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 LIPAP38571 399 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 NR4A2P43354 598 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 RPS7P62081 194 aaKnown RBP18.66■□□□□ 0.58
HOMER3-206ENST00000594439 CCL8P80075 99 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 KRTAP1-1Q07627 177 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 LOXL1Q08397 574 aaPredicted RBP18.66■□□□□ 0.58
HOMER3-206ENST00000594439 SPATC1Q76KD6 591 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 PQLC1Q8N2U9 271 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 RNF133Q8WVZ7 376 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 RDH5Q92781 318 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 YIPF5Q969M3 257 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 TEAD3Q99594 435 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 KCNJ15Q99712 375 aa18.66■□□□□ 0.58
HOMER3-206ENST00000594439 SPRY3O43610 288 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 TLX2O43763 284 aaPredicted RBP18.65■□□□□ 0.58
HOMER3-206ENST00000594439 ANOS1P23352 680 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 NAA10P41227 235 aaPredicted RBP18.65■□□□□ 0.58
HOMER3-206ENST00000594439 PRKXP51817 358 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 MRPS11P82912 194 aaKnown RBP18.65■□□□□ 0.58
HOMER3-206ENST00000594439 RIN1Q13671 783 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 TAF13Q15543 124 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 TSTQ16762 297 aaKnown RBP18.65■□□□□ 0.58
HOMER3-206ENST00000594439 AADACL4Q5VUY2 407 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 DRAM2Q6UX65 266 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 Q6ZR03 302 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 BCDIN3DQ7Z5W3 292 aaKnown RBP18.65■□□□□ 0.58
HOMER3-206ENST00000594439 ZNF454Q8N9F8 522 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 OTOSQ8NHW6 89 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 TMEM163Q8TC26 289 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 MSL2Q9HCI7 577 aa18.65■□□□□ 0.58
HOMER3-206ENST00000594439 HEXAP06865 529 aa18.64■□□□□ 0.57
HOMER3-206ENST00000594439 ALDH3A2P51648 485 aa18.64■□□□□ 0.57
HOMER3-206ENST00000594439 CDK5R2Q13319 367 aa18.64■□□□□ 0.57
HOMER3-206ENST00000594439 ZMAT1Q5H9K5 638 aa18.64■□□□□ 0.57
HOMER3-206ENST00000594439 FAM209AQ5JX71 171 aa18.64■□□□□ 0.57
HOMER3-206ENST00000594439 OR2T2Q6IF00 324 aa18.64■□□□□ 0.57
HOMER3-206ENST00000594439 CBR4Q8N4T8 237 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms