RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 KCNMB1Q16558 191 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 PHYHD1Q5SRE7 291 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 ANKRD16Q6P6B7 361 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 KLHL24Q6TFL4 600 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 AHSA2Q719I0 299 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.3□□□□□ -0.28
FOXA3-202ENST00000594297 ACBD7Q8N6N7 88 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 ZNF511Q8NB15 262 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 SLC26A10Q8NG04 563 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 OR6N2Q8NGY6 317 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 OR2T27Q8NH04 317 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 GGHQ92820 318 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 CCDC90BQ9GZT6 254 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 VCX3AQ9NNX9 186 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 POLE4Q9NR33 117 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 TMEM38BQ9NVV0 291 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 LAMP5Q9UJQ1 280 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 EXOGQ9Y2C4 368 aaKnown RBP13.3□□□□□ -0.28
FOXA3-202ENST00000594297 PMF1-BGLAPU3KQ54 211 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 ARFGEF3Q5TH69 2177 aa13.3□□□□□ -0.28
FOXA3-202ENST00000594297 DAPL1A0PJW8 107 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 MAGEA13PA6NCF6 341 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 TVP23AA6NH52 213 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 ZNF670-ZNF695F2Z2N8 137 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 ZNF593O00488 134 aaPredicted RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 MRPL3P09001 348 aaKnown RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 SPARCP09486 303 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 BMP4P12644 408 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 HOXB1P14653 301 aaPredicted RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 EGR1P18146 543 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 PAX7P23759 505 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 NAA10P41227 235 aaPredicted RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 SLC36A2Q495M3 483 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 TEX30Q5JUR7 227 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 C1QTNF12Q5T7M4 302 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 LINC01590Q5TEZ4 76 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 FAM27BQ5VT28 67 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 SLC18B1Q6NT16 456 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 FOXL2NBQ6ZUU3 175 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 SLC16A14Q7RTX9 510 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 WDFY1Q8IWB7 410 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 SLC35F2Q8IXU6 374 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 SLC22A24Q8N4F4 322 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 SVOPQ8N4V2 548 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 C1orf162Q8NEQ5 155 aaPredicted RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 OR10H4Q8NGA5 316 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 ASB17Q8WXJ9 295 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 C11orf40Q8WZ69 217 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 LGALS12Q96DT0 336 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 FBXO17Q96EF6 278 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 FOXN4Q96NZ1 517 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 C1QTNF6Q9BXI9 259 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 BPESC1Q9GZL8 116 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 DUSP21Q9H596 190 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 WDR76Q9H967 626 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 MARCH7Q9H992 704 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 MOV10Q9HCE1 1003 aaKnown RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 FGF20Q9NP95 211 aaPredicted RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 DIMT1Q9UNQ2 313 aaKnown RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 ERGIC3Q9Y282 383 aa13.29□□□□□ -0.28
FOXA3-202ENST00000594297 EXOSC1Q9Y3B2 195 aaKnown RBP13.29□□□□□ -0.28
FOXA3-202ENST00000594297 A0A087WXM4 84 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 ATP6V1G2-DDX39BF2Z307 99 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 CDK1P06493 297 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 CST2P09228 141 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 APOBEC3AP31941 199 aaPredicted RBP13.28□□□□□ -0.28
FOXA3-202ENST00000594297 CDAP32320 146 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 SRP14P37108 136 aaKnown RBP13.28□□□□□ -0.28
FOXA3-202ENST00000594297 SLC15A1P46059 708 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 CAPZA2P47755 286 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 FOXG1P55316 489 aaPredicted RBP13.28□□□□□ -0.28
FOXA3-202ENST00000594297 UBE2NP61088 152 aaKnown RBP13.28□□□□□ -0.28
FOXA3-202ENST00000594297 SLC35A2P78381 396 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 SCRN3Q0VDG4 424 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 KCTD18Q6PI47 426 aaPredicted RBP13.28□□□□□ -0.28
FOXA3-202ENST00000594297 TMPRSS11AQ6ZMR5 421 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 ZNF627Q7L945 461 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 SYT9Q86SS6 491 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 GJC3Q8NFK1 279 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 SEMA6DQ8NFY4 1073 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 OR52I1Q8NGK6 324 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 RNF121Q9H920 327 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 ADGRL4Q9HBW9 690 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 UGT2A1Q9Y4X1 527 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 PCDHGB5Q9Y5G0 923 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 COMMD3-BMI1R4GMX3 469 aa13.28□□□□□ -0.28
FOXA3-202ENST00000594297 IGKV1D-43A0A0B4J1Z2 117 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 LOC390937A0A1W2PQ73 354 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 LRP5LA4QPB2 252 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 VENTXO95231 258 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 TFP02787 698 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 RPSAP08865 295 aaKnown RBP13.27□□□□□ -0.29
FOXA3-202ENST00000594297 TACSTD2P09758 323 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 GAAP10253 952 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 B4GALT1P15291 398 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 IL2RGP31785 369 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 ARR3P36575 388 aa13.27□□□□□ -0.29
FOXA3-202ENST00000594297 ACTA2P62736 377 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms