RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CENPAP49450 140 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 HLXQ14774 488 aaPredicted RBP11.16□□□□□ -0.62
APOC1-209ENST00000592885 SAMD4BQ5PRF9 694 aaKnown RBP11.16□□□□□ -0.62
APOC1-209ENST00000592885 SLC18B1Q6NT16 456 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 RBMS3Q6XE24 437 aaKnown RBP11.16□□□□□ -0.62
APOC1-209ENST00000592885 ZNF771Q7L3S4 317 aaPredicted RBP11.16□□□□□ -0.62
APOC1-209ENST00000592885 C1orf87Q8N0U7 546 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 PGAM4Q8N0Y7 254 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 OR5AS1Q8N127 324 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 OR6V1Q8N148 313 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 CELF2-AS1Q8N7Q2 184 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 OR52J3Q8NH60 311 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 NSMCE2Q96MF7 247 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 TSSK2Q96PF2 358 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 SLC30A2Q9BRI3 323 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 IFT27Q9BW83 186 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 HCAR1Q9BXC0 346 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 NDE1Q9NXR1 346 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 NUP50Q9UKX7 468 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 B9D1Q9UPM9 204 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 NOP16Q9Y3C1 178 aaKnown RBP11.16□□□□□ -0.62
APOC1-209ENST00000592885 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
APOC1-209ENST00000592885 SNX3O60493 162 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 HIST1H1CP16403 213 aaKnown RBP11.15□□□□□ -0.62
APOC1-209ENST00000592885 GATA4P43694 442 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 GSSP48637 474 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 UBA52P62987 128 aaKnown RBP11.15□□□□□ -0.62
APOC1-209ENST00000592885 MALLQ13021 153 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 MEP1BQ16820 701 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 OTPQ5XKR4 325 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 ZNF620Q6ZNG0 422 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 LINC00471Q8N535 108 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 RNF148Q8N7C7 305 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 ZDHHC22Q8N966 263 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 OR10AD1Q8NGE0 317 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 OR2AJ1Q8NGZ0 328 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 ERGIC1Q969X5 290 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 NMNAT3Q96T66 252 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 ATF6BQ99941 703 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
APOC1-209ENST00000592885 IL1RAPQ9NPH3 570 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 RPRD1BQ9NQG5 326 aaKnown RBP11.15□□□□□ -0.62
APOC1-209ENST00000592885 DDX28Q9NUL7 540 aaKnown RBP11.15□□□□□ -0.62
APOC1-209ENST00000592885 MIOXQ9UGB7 285 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 TMCC3Q9ULS5 477 aa11.15□□□□□ -0.62
APOC1-209ENST00000592885 ARHGAP32A7KAX9 2087 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 TRAPPC2LH3BP13 241 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 ARPC2O15144 300 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 MLNRO43193 412 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 GPANK1O95872 356 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 WNT2P09544 360 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 ACSM4P0C7M7 580 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 RPS2P15880 293 aaKnown RBP11.14□□□□□ -0.63
APOC1-209ENST00000592885 RRM2P31350 389 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 SEC61A1P61619 476 aaKnown RBP11.14□□□□□ -0.63
APOC1-209ENST00000592885 TRAP1Q12931 704 aaKnown RBP11.14□□□□□ -0.63
APOC1-209ENST00000592885 TSPAN31Q12999 210 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 BTNL3Q6UXE8 466 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 LRRN1Q6UXK5 716 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 CFAP77Q6ZQR2 320 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 DOK3Q7L591 496 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.14□□□□□ -0.63
APOC1-209ENST00000592885 OR52L1Q8NGH7 329 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 OR4K13Q8NH42 304 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 SGMS2Q8NHU3 365 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 Q8TCH9 128 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 GNPDA2Q8TDQ7 276 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 PLEKHA8Q96JA3 519 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 PITX2Q99697 317 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 CDADC1Q9BWV3 514 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 SLC22A4Q9H015 551 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 SRA1Q9HD15 236 aaKnown RBP11.14□□□□□ -0.63
APOC1-209ENST00000592885 ESM1Q9NQ30 184 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 MMP26Q9NRE1 261 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 TMEM100Q9NV29 134 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 CD300AQ9UGN4 299 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 CYB5R1Q9UHQ9 305 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 V9GYQ6 96 aa11.14□□□□□ -0.63
APOC1-209ENST00000592885 KRT36O76013 467 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 IRF2P14316 349 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 GGT2P36268 569 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 CD200P41217 278 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 TPTEP56180 551 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 PAX8Q06710 450 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 GK2Q14410 553 aaPredicted RBP11.13□□□□□ -0.63
APOC1-209ENST00000592885 ZNF404Q494X3 552 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 KLF17Q5JT82 389 aaPredicted RBP11.13□□□□□ -0.63
APOC1-209ENST00000592885 CORO6Q6QEF8 472 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 C16orf89Q6UX73 402 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 C9orf139Q6ZV77 190 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 NLRC3Q7RTR2 1065 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 CPLX4Q7Z7G2 160 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 KLBQ86Z14 1044 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 LINC00346Q8IVM7 164 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 BHLHE23Q8NDY6 225 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 SDR9C7Q8NEX9 313 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 OR8B3Q8NGG8 313 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms