RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 TMPRSS5Q9H3S3 457 aa3.2□□□□□ -1.9
VMP1-216ENST00000592790 ZNF286AQ9HBT8 521 aa3.2□□□□□ -1.9
VMP1-216ENST00000592790 TM7SF3Q9NS93 570 aa3.2□□□□□ -1.9
VMP1-216ENST00000592790 PLEKHJ1Q9NW61 149 aa3.2□□□□□ -1.9
VMP1-216ENST00000592790 SLC2A8Q9NY64 477 aa3.2□□□□□ -1.9
VMP1-216ENST00000592790 PCOLCE2Q9UKZ9 415 aa3.2□□□□□ -1.9
VMP1-216ENST00000592790 ZNF346Q9UL40 294 aaKnown RBP3.2□□□□□ -1.9
VMP1-216ENST00000592790 EMC9Q9Y3B6 208 aa3.2□□□□□ -1.9
VMP1-216ENST00000592790 LSM5Q9Y4Y9 91 aaKnown RBP3.2□□□□□ -1.9
VMP1-216ENST00000592790 FLVCR1Q9Y5Y0 555 aa3.2□□□□□ -1.9
VMP1-216ENST00000592790 SIRT4Q9Y6E7 314 aaPredicted RBP3.2□□□□□ -1.9
VMP1-216ENST00000592790 SZT2Q5T011 3432 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 HTTP42858 3142 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TRBV5-7A0A0A0MS05 114 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TMEM272A0A1B0GTI8 110 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PRAMEF27A3QJZ7 478 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 A6NCN8 305 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 OR6C68A6NDL8 312 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 MFNGO00587 321 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 DVL2O14641 736 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 GATCO43716 136 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 DFFBO76075 338 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SEMA4FO95754 770 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PLGP00747 810 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 CRHP06850 196 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ACRP10323 421 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ZNF43P17038 809 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 DUSP1P28562 367 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 BTCP35070 178 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 KCNJ3P48549 501 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 EMDP50402 254 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PPT1P50897 306 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 RAB4BP61018 213 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 RPL23AP62750 156 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 SQSTM1Q13501 440 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NNATQ16517 81 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 BEX5Q5H9J7 111 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PABPC1L2AQ5JQF8 200 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FAM78AQ5JUQ0 283 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 THEM4Q5T1C6 240 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 C1orf53Q5VUE5 145 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SSX6Q7RTT6 188 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SYT9Q86SS6 491 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SLC30A7Q8NEW0 376 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 OR4D9Q8NGE8 314 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 OR5T3Q8NGG3 340 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 OR1S1Q8NH92 325 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NUDCD2Q8WVJ2 157 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TMED6Q8WW62 240 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ZG16BQ96DA0 208 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 OR2A5Q96R48 311 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ADOQ96SZ5 270 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NIPSNAP3BQ9BS92 247 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SUCNR1Q9BXA5 334 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 BCL2L14Q9BZR8 327 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SELENOIQ9C0D9 397 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 CERS4Q9HA82 394 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 LHX9Q9NQ69 397 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 MBNL1Q9NR56 388 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 UFSP2Q9NUQ7 469 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 UQCC1Q9NVA1 299 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NECAP2Q9NVZ3 263 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SLCO1C1Q9NYB5 712 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 CYP8B1Q9UNU6 501 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 MRPS17Q9Y2R5 130 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 UBE2J1Q9Y385 318 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 RBM7Q9Y580 266 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 MYO10Q9HD67 2058 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 XIRP2A4UGR9 3374 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 CCDC88CQ9P219 2028 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 LOC102725191A0A1B0GVB3 256 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NPIPA2E9PIF3 369 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NPIPA3F8WFD2 350 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SULT2B1O00204 365 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ST8SIA3O43173 380 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 DKK1O94907 266 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SFT2D2O95562 160 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 KNG1P01042 644 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 IFNA10P01566 189 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ANKRD34CP0C6C1 535 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ADRA2CP18825 462 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 RPL12P30050 165 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 EIF1P41567 113 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 SLC9A3R2Q15599 337 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SGCAQ16586 387 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ZNF674Q2M3X9 581 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 GFOD2Q3B7J2 385 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 Q3ZCU0 254 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TMEM215Q68D42 235 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FAAP20Q6NZ36 180 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TMEM71Q6P5X7 295 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NHLRC1Q6VVB1 395 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 COX15Q7KZN9 410 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 VN1R4Q7Z5H5 301 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ABHD12BQ7Z5M8 362 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 WDR5BQ86VZ2 330 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ANGPTL5Q86XS5 388 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 CARFQ8N187 725 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 OR51A2Q8NGJ7 313 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 OR14L1PQ8NHC6 308 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms