RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PYDC1Q8WXC3 89 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 DUS3LQ96G46 650 aaKnown RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 CENPNQ96H22 339 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 DIRC2Q96SL1 478 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 NMNAT2Q9BZQ4 307 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 BPESC1Q9GZL8 116 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 WDR76Q9H967 626 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 MRPL22Q9NWU5 206 aaKnown RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 NKIRAS2Q9NYR9 191 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 CGGBP1Q9UFW8 167 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 PURGQ9UJV8 347 aaKnown RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 ZDHHC8Q9ULC8 765 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 JMJD1CQ15652 2540 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 FN1P02751 2386 aaKnown RBP8.6□□□□□ -1.03
BRCA1-227ENST00000591849 J3QW42 95 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 SURF4O15260 269 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 RAC2P15153 192 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 SELEP16581 610 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 ACHEP22303 614 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 COL8A2P25067 703 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 HSD11B1P28845 292 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 GZMKP49863 264 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 PRKXP51817 358 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 ESRRGP62508 458 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 TNFAIP6P98066 277 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-227ENST00000591849 PSG7Q13046 419 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 PTGES3Q15185 160 aaKnown RBP8.6□□□□□ -1.03
BRCA1-227ENST00000591849 TMEM249Q2WGJ8 235 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 HFEQ30201 348 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 FAHD1Q6P587 224 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 LYPD4Q6UWN0 246 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 USP51Q70EK9 711 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 CXXC5Q7LFL8 322 aaKnown RBP8.6□□□□□ -1.03
BRCA1-227ENST00000591849 OR5AS1Q8N127 324 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF283Q8N7M2 679 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 OR2Z1Q8NG97 314 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 ZNRF4Q8WWF5 429 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 GTF3AQ92664 365 aaKnown RBP8.6□□□□□ -1.03
BRCA1-227ENST00000591849 HAVCR1Q96D42 359 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 SLAMF6Q96DU3 332 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 ZMYND19Q96E35 227 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-227ENST00000591849 ELMOD3Q96FG2 381 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 TIMD4Q96H15 378 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF582Q96NG8 517 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-227ENST00000591849 SP140LQ9H930 580 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 CHODLQ9H9P2 273 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 SAP30LQ9HAJ7 183 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 SLC25A19Q9HC21 320 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 MSL2Q9HCI7 577 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 ORC6Q9Y5N6 252 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 COMMD3-BMI1R4GMX3 469 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 VPS13CQ709C8 3753 aa8.6□□□□□ -1.03
BRCA1-227ENST00000591849 IGHV1-69-2A0A0G2JMI3 117 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF878C9JN71 531 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 M0R135 149 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 ICMTO60725 284 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 MITFO75030 526 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-227ENST00000591849 IGHV1-46P01743 117 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 APOC1P02654 83 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 H2BFMP0C1H6 154 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 ACSM4P0C7M7 580 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 IGFBP5P24593 272 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 CHN2P52757 468 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 TMEM33P57088 247 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 ACTR3P61158 418 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 GRB2P62993 217 aaKnown RBP8.59□□□□□ -1.03
BRCA1-227ENST00000591849 MRPS11P82912 194 aaKnown RBP8.59□□□□□ -1.03
BRCA1-227ENST00000591849 SLC3A1Q07837 685 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 APOFQ13790 326 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 HLXQ14774 488 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-227ENST00000591849 TEX30Q5JUR7 227 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 FAM209AQ5JX71 171 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 SLC35D3Q5M8T2 416 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 LCN1P1Q5VSP4 162 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 OR2T2Q6IF00 324 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 MRPL21Q7Z2W9 205 aaKnown RBP8.59□□□□□ -1.03
BRCA1-227ENST00000591849 DPY19L4Q7Z388 723 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 PEG10Q86TG7 708 aaKnown RBP8.59□□□□□ -1.03
BRCA1-227ENST00000591849 PARP8Q8N3A8 854 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 THEM6Q8WUY1 208 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 SPRYD4Q8WW59 207 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-227ENST00000591849 CCL17Q92583 94 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF799Q96GE5 643 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 MAP6Q96JE9 813 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 C1QTNF5Q9BXJ0 243 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 POFUT1Q9H488 388 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 RIBC2Q9H4K1 309 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 NARFLQ9H6Q4 476 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 OAZ3Q9UMX2 235 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 CSPG4Q6UVK1 2322 aa8.59□□□□□ -1.03
BRCA1-227ENST00000591849 RTTNQ86VV8 2226 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 HIVEP2P31629 2446 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 IGHV4-61A0A0C4DH41 118 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 LOC100289279A0A1B0GTE1 492 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 LRP5LA4QPB2 252 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 GGT3PA6NGU5 568 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 ZSCAN5BA6NJL1 495 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 VWC2LB2RUY7 222 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 PRODHO43272 600 aa8.58□□□□□ -1.04
BRCA1-227ENST00000591849 TBX1O43435 398 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms