RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 BHLHE23Q8NDY6 225 aa18.23■□□□□ 0.51
DDX39A-215ENST00000590696 OR52J3Q8NH60 311 aa18.23■□□□□ 0.51
DDX39A-215ENST00000590696 C7orf34Q96L11 122 aa18.23■□□□□ 0.51
DDX39A-215ENST00000590696 SLC30A2Q9BRI3 323 aa18.23■□□□□ 0.51
DDX39A-215ENST00000590696 WDR76Q9H967 626 aa18.23■□□□□ 0.51
DDX39A-215ENST00000590696 SRA1Q9HD15 236 aaKnown RBP18.23■□□□□ 0.51
DDX39A-215ENST00000590696 KRCC1Q9NPI7 259 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-215ENST00000590696 MIOXQ9UGB7 285 aa18.23■□□□□ 0.51
DDX39A-215ENST00000590696 IGHV3OR16-10A0A075B7F0 116 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 IQCF6A8MYZ5 107 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 F5H5P2 479 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 TMPRSS2O15393 492 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 PPP1R3DO95685 299 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 IGHV4-38-2P0DP08 117 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 CPT2P23786 658 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 GNB2P62879 340 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 RSPO1Q2MKA7 263 aaPredicted RBP18.22■□□□□ 0.51
DDX39A-215ENST00000590696 GLYATQ6IB77 296 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 BTNL3Q6UXE8 466 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 MOGAT3Q86VF5 341 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 ERMAPQ96PL5 475 aaPredicted RBP18.22■□□□□ 0.51
DDX39A-215ENST00000590696 TMEM246Q9BRR3 403 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 ABCD2Q9UBJ2 740 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 B9D1Q9UPM9 204 aa18.22■□□□□ 0.51
DDX39A-215ENST00000590696 IGLV1-36A0A0B4J1U3 117 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 PSME3P61289 254 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 DBPQ10586 325 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-215ENST00000590696 COX10Q12887 443 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 KRT72Q14CN4 511 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 ZNF181Q2M3W8 571 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 FAM201AQ5SY85 155 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 LEG1Q6P5S2 330 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 LRRN1Q6UXK5 716 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 JAZF1Q86VZ6 243 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 OR6V1Q8N148 313 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 PARP8Q8N3A8 854 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 FAM86B1Q8N7N1 296 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 RAB40AQ8WXH6 277 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 NEIL1Q96FI4 390 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-215ENST00000590696 DCAF13Q9NV06 445 aaKnown RBP18.21■□□□□ 0.51
DDX39A-215ENST00000590696 TMEM100Q9NV29 134 aa18.21■□□□□ 0.51
DDX39A-215ENST00000590696 SAMD4AQ9UPU9 718 aaKnown RBP18.21■□□□□ 0.51
DDX39A-215ENST00000590696 SOX21Q9Y651 276 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-215ENST00000590696 IGHV2-70DA0A0C4DH43 119 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 LRRC30A6NM36 301 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 HLA-DPB1P04440 258 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 RNASE1P07998 156 aaKnown RBP18.2■□□□□ 0.5
DDX39A-215ENST00000590696 PPIAL4GP0DN37 164 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 FPR3P25089 353 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 PMELP40967 661 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 PRSS12P56730 875 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 PRR31Q5SQ13 230 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 COLCA1Q6ZS62 124 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 FANK1Q8TC84 345 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 SLC25A28Q96A46 364 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 PLEKHA8Q96JA3 519 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 DHRS1Q96LJ7 313 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 NMNAT3Q96T66 252 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 FUZQ9BT04 418 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 HCAR1Q9BXC0 346 aa18.2■□□□□ 0.5
DDX39A-215ENST00000590696 RENP00797 406 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 SELEP16581 610 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 MDH1P40925 334 aaKnown RBP18.19■□□□□ 0.5
DDX39A-215ENST00000590696 MTNR1AP48039 350 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 SLC9A3R2Q15599 337 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 RFX4Q33E94 735 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 ZNF404Q494X3 552 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 CFAP77Q6ZQR2 320 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 C9orf139Q6ZV77 190 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 LINC00346Q8IVM7 164 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 C1orf87Q8N0U7 546 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 SLC26A10Q8NG04 563 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 OR8B3Q8NGG8 313 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 DACT3Q96B18 629 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-215ENST00000590696 UPRTQ96BW1 309 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 OR8B2Q96RD0 313 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 OR52D1Q9H346 318 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 ZNF696Q9H7X3 374 aa18.19■□□□□ 0.5
DDX39A-215ENST00000590696 A0A1B0GWJ7 208 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 F5H5K5 113 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 GMNNO75496 209 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 FSTL3O95633 263 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 ACSM4P0C7M7 580 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 HIST1H1CP16403 213 aaKnown RBP18.18■□□□□ 0.5
DDX39A-215ENST00000590696 SLC6A6P31641 620 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 GK2Q14410 553 aaPredicted RBP18.18■□□□□ 0.5
DDX39A-215ENST00000590696 KRTAP27-1Q3LI81 207 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 SLC18B1Q6NT16 456 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 NAA40Q86UY6 237 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 OR4K13Q8NH42 304 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 PITX2Q99697 317 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 CDADC1Q9BWV3 514 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 UNKLQ9H9P5 680 aaKnown RBP18.18■□□□□ 0.5
DDX39A-215ENST00000590696 RPRD1BQ9NQG5 326 aaKnown RBP18.18■□□□□ 0.5
DDX39A-215ENST00000590696 ZNF446Q9NWS9 450 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 V9GYQ6 96 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 MEGF8Q7Z7M0 2845 aa18.18■□□□□ 0.5
DDX39A-215ENST00000590696 TRAV40A0A0B4J280 105 aa18.17■□□□□ 0.5
DDX39A-215ENST00000590696 KIR2DS1A0A191URI9 304 aa18.17■□□□□ 0.5
DDX39A-215ENST00000590696 CLDN34H7C241 214 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms