RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 PSKH1P11801 424 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 DAOP14920 347 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 SLC25A16P16260 332 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 OTX1P32242 354 aaPredicted RBP10.17□□□□□ -0.78
LIG3-213ENST00000590630 SLC15A1P46059 708 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 PDLIM4P50479 330 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 MMP15P51511 669 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 TPTEP56180 551 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 RPS7P62081 194 aaKnown RBP10.17□□□□□ -0.78
LIG3-213ENST00000590630 ZSCAN26Q16670 478 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 ZMAT1Q5H9K5 638 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 C12orf73Q69YU5 71 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 FBXW12Q6X9E4 464 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 RHOUQ7L0Q8 258 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 DPY19L4Q7Z388 723 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 BIVMQ86UB2 503 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 TIGD4Q8IY51 512 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 PQLC1Q8N2U9 271 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 CIARTQ8N365 385 aaPredicted RBP10.17□□□□□ -0.78
LIG3-213ENST00000590630 ZNF454Q8N9F8 522 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 BBS1Q8NFJ9 593 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 C10orf105Q8TEF2 133 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 SLAMF6Q96DU3 332 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 ZMYND19Q96E35 227 aaPredicted RBP10.17□□□□□ -0.78
LIG3-213ENST00000590630 COPS4Q9BT78 406 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 C1QTNF5Q9BXJ0 243 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 REG4Q9BYZ8 158 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 NKIRAS2Q9NYR9 191 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 USE1Q9NZ43 259 aa10.17□□□□□ -0.78
LIG3-213ENST00000590630 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 M0R135 149 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 PRKYO43930 277 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 TIMM8AO60220 97 aaPredicted RBP10.16□□□□□ -0.78
LIG3-213ENST00000590630 RAC2P15153 192 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 KITLGP21583 273 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 ZNF81P51508 661 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 ALDH3A2P51648 485 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 RAD23AP54725 363 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 GRB2P62993 217 aaKnown RBP10.16□□□□□ -0.78
LIG3-213ENST00000590630 MRPS11P82912 194 aaKnown RBP10.16□□□□□ -0.78
LIG3-213ENST00000590630 EFNB1P98172 346 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 PSG7Q13046 419 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 APOFQ13790 326 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 EIF2B1Q14232 305 aaKnown RBP10.16□□□□□ -0.78
LIG3-213ENST00000590630 TAF13Q15543 124 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 ALKBH6Q3KRA9 238 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 TMEM255AQ5JRV8 349 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 LCN1P1Q5VSP4 162 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 DRAM2Q6UX65 266 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 ZNF786Q8N393 782 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 CBR4Q8N4T8 237 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 TCEANCQ8N8B7 351 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 ZNF540Q8NDQ6 660 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 OTOSQ8NHW6 89 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 TMEM163Q8TC26 289 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 UBASH3BQ8TF42 649 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 HAVCR1Q96D42 359 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 ZNF799Q96GE5 643 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 PIMREGQ9BSJ6 248 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 C9orf16Q9BUW7 83 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 POFUT1Q9H488 388 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 RIBC2Q9H4K1 309 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 ZDHHC8Q9ULC8 765 aa10.16□□□□□ -0.78
LIG3-213ENST00000590630 NF1P21359 2839 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 TANC2Q9HCD6 1990 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 SLC22A31A6NKX4 558 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 SMAD7O15105 426 aaKnown RBP10.15□□□□□ -0.78
LIG3-213ENST00000590630 TLX2O43763 284 aaPredicted RBP10.15□□□□□ -0.78
LIG3-213ENST00000590630 SELENOFO60613 162 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 APOC1P02654 83 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 LCATP04180 440 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 LYNP07948 512 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 ADH4P08319 380 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 GIFP27352 417 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 POLR2IP36954 125 aaKnown RBP10.15□□□□□ -0.78
LIG3-213ENST00000590630 SLC6A9P48067 706 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 MALLQ13021 153 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 GGTLC2Q14390 218 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 FAM209AQ5JX71 171 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 NXNL2Q5VZ03 156 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 RNF133Q8WVZ7 376 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 CMBLQ96DG6 245 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 DIRC2Q96SL1 478 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 TEAD3Q99594 435 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 KCNJ15Q99712 375 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 ABHD6Q9BV23 337 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 YIPF3Q9GZM5 350 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 TOR3AQ9H497 397 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 CENPMQ9NSP4 180 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 PTTG3PQ9NZH4 202 aa10.15□□□□□ -0.78
LIG3-213ENST00000590630 H2AFY2Q9P0M6 372 aaPredicted RBP10.15□□□□□ -0.78
LIG3-213ENST00000590630 PURGQ9UJV8 347 aaKnown RBP10.15□□□□□ -0.78
LIG3-213ENST00000590630 HIVEP2P31629 2446 aa10.14□□□□□ -0.79
LIG3-213ENST00000590630 ZFHX3Q15911 3703 aa10.14□□□□□ -0.79
LIG3-213ENST00000590630 A0A096LNT2 108 aa10.14□□□□□ -0.79
LIG3-213ENST00000590630 CCDC182A6NF36 153 aa10.14□□□□□ -0.79
LIG3-213ENST00000590630 VWC2LB2RUY7 222 aa10.14□□□□□ -0.79
LIG3-213ENST00000590630 M0R129 80 aa10.14□□□□□ -0.79
LIG3-213ENST00000590630 NCR1O76036 304 aa10.14□□□□□ -0.79
LIG3-213ENST00000590630 IGHV1-46P01743 117 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms