RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 IGHV3OR16-10A0A075B7F0 116 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 FAM181BA6NEQ2 426 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 H0YL77 283 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 RER1O15258 196 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 MLNRO43193 412 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 ENSAO43768 121 aaKnown RBP11.66□□□□□ -0.54
VMP1-209ENST00000588915 ZNF205O95201 554 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 TXNDC12O95881 172 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 DBHP09172 617 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 ZNF26P17031 533 aaPredicted RBP11.66□□□□□ -0.54
VMP1-209ENST00000588915 CRABP1P29762 137 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 KCNJ8Q15842 424 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 DEFB112Q30KQ8 113 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 MIDNQ504T8 468 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 IFI44LQ53G44 452 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 CD276Q5ZPR3 534 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 DNM1P34Q6PK57 102 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 TBPL2Q6SJ96 375 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 Q6YL49 198 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 ZNF841Q6ZN19 808 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 C17orf107Q6ZR85 190 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 CBLL1Q75N03 491 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 VTCN1Q7Z7D3 282 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 MOGAT3Q86VF5 341 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 JAZF1Q86VZ6 243 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 OR11L1Q8NGX0 322 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 SAR1AQ9NR31 198 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 KIF17Q9P2E2 1029 aa11.66□□□□□ -0.54
VMP1-209ENST00000588915 SOX21Q9Y651 276 aaPredicted RBP11.66□□□□□ -0.54
VMP1-209ENST00000588915 A0A0G2JK05 382 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 LOC100653049A0A140TA62 436 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 F5H5P2 479 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 P2RY10O00398 339 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 TNFRSF13BO14836 293 aaPredicted RBP11.65□□□□□ -0.54
VMP1-209ENST00000588915 TIMM23O14925 209 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 SLC22A2O15244 555 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 KRT34O76011 436 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 OMGP23515 440 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 FPR3P25089 353 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 PSMB10P40306 273 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 PMELP40967 661 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 GPR4P46093 362 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 RPS6KA3P51812 740 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 COX10Q12887 443 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 ECH1Q13011 328 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 C11orf91Q3C1V1 193 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 OLFML2AQ68BL7 652 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 DPY19L2P2Q6ZN68 376 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 CYP4Z1Q86W10 505 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 KIR3DL3Q8N743 410 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 SLC7A13Q8TCU3 470 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 WFDC12Q8WWY7 111 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 CITED1Q99966 193 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 SLC22A4Q9H015 551 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 NUAK2Q9H093 628 aa11.65□□□□□ -0.54
VMP1-209ENST00000588915 NOP16Q9Y3C1 178 aaKnown RBP11.65□□□□□ -0.54
VMP1-209ENST00000588915 VWFP04275 2813 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 A0A1W2PRQ8 180 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 CLPSL1A2RUU4 121 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 M0QZ24 198 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 CXCR6O00574 342 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 IMPA2O14732 288 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 NDUFA2O43678 99 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 TROVE2P10155 538 aaKnown RBP eCLIP11.64□□□□□ -0.55
VMP1-209ENST00000588915 CD200P41217 278 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 RAG2P55895 527 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 FGF12P61328 243 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 MAB21L1Q13394 359 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 DGCR6Q14129 220 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 PDCD1Q15116 288 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 RSPO1Q2MKA7 263 aaPredicted RBP11.64□□□□□ -0.55
VMP1-209ENST00000588915 KRTAP27-1Q3LI81 207 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 FIP1L1Q6UN15 594 aaKnown RBP11.64□□□□□ -0.55
VMP1-209ENST00000588915 BRD3OSQ6XYD6 125 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 FKBP9P1Q75LS8 142 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 PLPP7Q8NBV4 271 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 MMP27Q9H306 513 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 RERGLQ9H628 205 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 TRIM36Q9NQ86 728 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 CMTM6Q9NX76 183 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 C1RLQ9NZP8 487 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 ERVK-18Q9QC07 812 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 POLR1DQ9Y2S0 133 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 LHFPL6Q9Y693 200 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 ENPP4Q9Y6X5 453 aa11.64□□□□□ -0.55
VMP1-209ENST00000588915 MDFIC2A0A1B0GVS7 189 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 ZNF879B4DU55 563 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 NDUFAB1O14561 156 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 PPP1R3DO95685 299 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 PTBP3O95758 552 aaKnown RBP11.63□□□□□ -0.55
VMP1-209ENST00000588915 ZNF682O95780 498 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 CDKN2AP42771 156 aaKnown RBP11.63□□□□□ -0.55
VMP1-209ENST00000588915 RAD23AP54725 363 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 MALLQ13021 153 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 GK2Q14410 553 aaPredicted RBP11.63□□□□□ -0.55
VMP1-209ENST00000588915 SLC36A3Q495N2 470 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 FAM201AQ5SY85 155 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 LYPD2Q6UXB3 125 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 ZNF620Q6ZNG0 422 aa11.63□□□□□ -0.55
VMP1-209ENST00000588915 PTCHD4Q6ZW05 846 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms