RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ZNF704Q6ZNC4 412 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-206ENST00000588860 FOXL2NBQ6ZUU3 175 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-206ENST00000588860 MED12LQ86YW9 2145 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 GPR137CQ8N3F9 429 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 MEIOBQ8N635 442 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 C19orf18Q8NEA5 215 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 DNAAF1Q8NEP3 725 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF845Q96IR2 970 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF416Q9BWM5 594 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 PBOV1Q9GZY1 135 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 HDHD2Q9H0R4 259 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 FAM206AQ9NX38 181 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 TAS2R4Q9NYW5 299 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 CKLFQ9UBR5 152 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 FOXD3Q9UJU5 478 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-206ENST00000588860 HHLA2Q9UM44 414 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 SPATA2Q9UM82 520 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 RCE1Q9Y256 329 aa7.74□□□□□ -1.17
SMAD4-206ENST00000588860 ARPC4-TTLL3A0A0A6YYG9 625 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 ACOT7O00154 380 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 RER1O15258 196 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 LMX1BO60663 402 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 TMEM127O75204 238 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 ISG15P05161 165 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 CALCBP10092 127 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 WT1P19544 449 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-206ENST00000588860 FSTP19883 344 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 PITPNBP48739 271 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 CX3CR1P49238 355 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 CCL11P51671 97 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 CLDN12P56749 244 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 CLDN18P56856 261 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 SOX8P57073 446 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 GRB2P62993 217 aaKnown RBP7.73□□□□□ -1.17
SMAD4-206ENST00000588860 RIN1Q13671 783 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 ENDOGQ14249 297 aaKnown RBP7.73□□□□□ -1.17
SMAD4-206ENST00000588860 RAB11BQ15907 218 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 C11orf91Q3C1V1 193 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 TMEM244Q5VVB8 128 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 BAIAP2L2Q6UXY1 529 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 GDPD3Q7L5L3 318 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 LUZP2Q86TE4 346 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 ELMOD2Q8IZ81 293 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 LRRC18Q8N456 261 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 FAM109AQ8N4B1 249 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 TMEM178AQ8NBL3 297 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 ABHD3Q8WU67 409 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 ASB5Q8WWX0 329 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 NABP1Q96AH0 204 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 SCMH1Q96GD3 660 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 WACQ9BTA9 647 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 SLC22A4Q9H015 551 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 NELFAQ9H3P2 528 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF552Q9H707 407 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-206ENST00000588860 EXO5Q9H790 373 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 NIPAL2Q9H841 368 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 MOB1AQ9H8S9 216 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 LIN7BQ9HAP6 207 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 PNRC2Q9NPJ4 139 aaKnown RBP7.73□□□□□ -1.17
SMAD4-206ENST00000588860 KLK13Q9UKR3 277 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 PCDHGA9Q9Y5G4 932 aaKnown RBP7.73□□□□□ -1.17
SMAD4-206ENST00000588860 N6AMT1Q9Y5N5 214 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 MYO7BQ6PIF6 2116 aa7.73□□□□□ -1.17
SMAD4-206ENST00000588860 A0A1B0GVI7 797 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF891A8MT65 544 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 SIAH2O43255 324 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 HLA-DQB1P01920 261 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 TTRP02766 147 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ITGB2P05107 769 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ACSM4P0C7M7 580 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF708P17019 499 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 DCTDP32321 178 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 NR4A2P43354 598 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 RFX2P48378 723 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 PRKXP51817 358 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF121P58317 390 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 MRPS34P82930 218 aaKnown RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 PITPNAQ00169 270 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 CLN3Q13286 438 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 C3AR1Q16581 482 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 HYAL4Q2M3T9 481 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 DEFB109BQ30KR1 87 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 RNASE12Q5GAN4 147 aaKnown RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF57Q68EA5 555 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 PYHIN1Q6K0P9 492 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 MZT2BQ6NZ67 158 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 CCBE1Q6UXH8 406 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 NRARPQ7Z6K4 114 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF554Q86TJ5 538 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 COMMD2Q86X83 199 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 IZUMO1Q8IYV9 350 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 CMTM4Q8IZR5 234 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ZNF283Q8N7M2 679 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 GJC3Q8NFK1 279 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 CPT1CQ8TCG5 803 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 HAS2Q92819 552 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 RFT1Q96AA3 541 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 TMEM45BQ96B21 275 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms