RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 CDC42P60953 191 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 RPS7P62081 194 aaKnown RBP13.41□□□□□ -0.26
NCLN-203ENST00000587740 HGFACQ04756 655 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 RIN1Q13671 783 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 SLC35D3Q5M8T2 416 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 KRT80Q6KB66 452 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 CORO6Q6QEF8 472 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 LYPD4Q6UWN0 246 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 VASH1Q7L8A9 365 aaPredicted RBP13.41□□□□□ -0.26
NCLN-203ENST00000587740 LINC00346Q8IVM7 164 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 ZNF511Q8NB15 262 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 NUP37Q8NFH4 326 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 SGMS2Q8NHU3 365 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 DOK1Q99704 481 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 RAB1BQ9H0U4 201 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 TOR3AQ9H497 397 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 METTL17Q9H7H0 456 aaPredicted RBP13.41□□□□□ -0.26
NCLN-203ENST00000587740 H2AFY2Q9P0M6 372 aaPredicted RBP13.41□□□□□ -0.26
NCLN-203ENST00000587740 CYB5R1Q9UHQ9 305 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 NDRG4Q9ULP0 352 aaKnown RBP13.41□□□□□ -0.26
NCLN-203ENST00000587740 COMMD3-BMI1R4GMX3 469 aa13.41□□□□□ -0.26
NCLN-203ENST00000587740 TMEM129A0AVI4 362 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 TMEM89A2RUT3 159 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 LYNX1G3V0Z9 82 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 ZNF593O00488 134 aaPredicted RBP13.4□□□□□ -0.26
NCLN-203ENST00000587740 RER1O15258 196 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 SNAP29O95721 258 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 LYNX1P0DP58 116 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 GSTT1P30711 240 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 GGT2P36268 569 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 ENTPD1P49961 510 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 DVL1P1P54792 670 aaPredicted RBP13.4□□□□□ -0.26
NCLN-203ENST00000587740 SNTB2Q13425 540 aaKnown RBP13.4□□□□□ -0.26
NCLN-203ENST00000587740 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 CCDC92Q53HC0 331 aaPredicted RBP13.4□□□□□ -0.26
NCLN-203ENST00000587740 LINC01590Q5TEZ4 76 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 LPCAT4Q643R3 524 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 SLC18B1Q6NT16 456 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 ERI1Q8IV48 349 aaKnown RBP13.4□□□□□ -0.26
NCLN-203ENST00000587740 ZNF786Q8N393 782 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 PAQR4Q8N4S7 273 aaPredicted RBP13.4□□□□□ -0.26
NCLN-203ENST00000587740 BBS1Q8NFJ9 593 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 TMEM163Q8TC26 289 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 POM121L2Q96KW2 1035 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 WDR76Q9H967 626 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 C8orf4Q9NR00 106 aa13.4□□□□□ -0.26
NCLN-203ENST00000587740 EIF3KQ9UBQ5 218 aaKnown RBP13.4□□□□□ -0.26
NCLN-203ENST00000587740 LOC100509620A0A075B734 347 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 M0R129 80 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 SYNGR3O43761 229 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 RGS9O75916 674 aaPredicted RBP13.39□□□□□ -0.27
NCLN-203ENST00000587740 SPARCP09486 303 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 THBS4P35443 961 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 RAD52P43351 418 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 RPS23P62266 143 aaKnown RBP13.39□□□□□ -0.27
NCLN-203ENST00000587740 HIST1H3AP68431 136 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 EFNB1P98172 346 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 APOFQ13790 326 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 TEX30Q5JUR7 227 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 ELFN2Q5R3F8 820 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 HIST2H3PS2Q5TEC6 136 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 TMEM154Q6P9G4 183 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 UNQ6126/PRO20091Q6UXV3 157 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 HIST2H3AQ71DI3 136 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 GALNT4Q8N4A0 578 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 C3orf56Q8N813 242 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 OR6N2Q8NGY6 317 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 OR1F12Q8NHA8 337 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 NEU4Q8WWR8 484 aaPredicted RBP13.39□□□□□ -0.27
NCLN-203ENST00000587740 ZMYND19Q96E35 227 aaPredicted RBP13.39□□□□□ -0.27
NCLN-203ENST00000587740 HRASLS5Q96KN8 279 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 IL4I1Q96RQ9 567 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 INTS14Q96SY0 518 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 MBOAT4Q96T53 435 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 PITX2Q99697 317 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 HDHD2Q9H0R4 259 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 ZNF442Q9H7R0 627 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 IMPAD1Q9NX62 359 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 ATPIF1Q9UII2 106 aa13.39□□□□□ -0.27
NCLN-203ENST00000587740 OR6C6A6NF89 314 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 FAM157BP0CG42 384 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 SLC2A5P22732 501 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 PEX2P28328 305 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 GLRXP35754 106 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 RPS27P42677 84 aaKnown RBP13.38□□□□□ -0.27
NCLN-203ENST00000587740 UCP2P55851 309 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 ACTG1P63261 375 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 LCN1P1Q5VSP4 162 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 NXNL2Q5VZ03 156 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 ARL9Q6T311 187 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 SHFQ7M4L6 423 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 PACRGLQ8N7B6 248 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 OR8J1Q8NGP2 316 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 FAM81AQ8TBF8 368 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 UBASH3BQ8TF42 649 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 TRUB1Q8WWH5 349 aaKnown RBP13.38□□□□□ -0.27
NCLN-203ENST00000587740 RDH12Q96NR8 316 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 TEAD3Q99594 435 aa13.38□□□□□ -0.27
NCLN-203ENST00000587740 COQ7Q99807 217 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms