RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 ITLN1Q8WWA0 313 aa13.6□□□□□ -0.23
CXXC1-209ENST00000587342 APOBEC3DQ96AK3 386 aaPredicted RBP13.6□□□□□ -0.23
CXXC1-209ENST00000587342 SIGLEC11Q96RL6 698 aa13.6□□□□□ -0.23
CXXC1-209ENST00000587342 DIRC2Q96SL1 478 aa13.6□□□□□ -0.23
CXXC1-209ENST00000587342 NIPSNAP1Q9BPW8 284 aa13.6□□□□□ -0.23
CXXC1-209ENST00000587342 RBM4Q9BWF3 364 aaKnown RBP13.6□□□□□ -0.23
CXXC1-209ENST00000587342 DGCR6LQ9BY27 220 aa13.6□□□□□ -0.23
CXXC1-209ENST00000587342 NMNAT2Q9BZQ4 307 aa13.6□□□□□ -0.23
CXXC1-209ENST00000587342 TUBG2Q9NRH3 451 aa13.6□□□□□ -0.23
CXXC1-209ENST00000587342 TBC1D23Q9NUY8 699 aa13.6□□□□□ -0.23
CXXC1-209ENST00000587342 J3QW42 95 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 MLNRO43193 412 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 PLPP2O43688 288 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 IGHV2-70P01814 119 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 GYPBP06028 91 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 CLUP10909 449 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 RGS6P49758 472 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 TRAP1Q12931 704 aaKnown RBP13.59□□□□□ -0.23
CXXC1-209ENST00000587342 FAM98BQ52LJ0 330 aaKnown RBP13.59□□□□□ -0.23
CXXC1-209ENST00000587342 RPL13AP3Q6NVV1 102 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 LINC00471Q8N535 108 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 PROKR2Q8NFJ6 384 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 PTP4A1Q93096 173 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 PITX2Q99697 317 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 ATF6BQ99941 703 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 THTPAQ9BU02 230 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 TSSK6Q9BXA6 273 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 C1QTNF5Q9BXJ0 243 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 C1orf21Q9H246 121 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 REEP1Q9H902 201 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 TMEM106BQ9NUM4 274 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
CXXC1-209ENST00000587342 ANK2Q01484 3957 aa13.58□□□□□ -0.23
CXXC1-209ENST00000587342 F5H5K5 113 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 H0YL77 283 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 RAP2AP10114 183 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 MMP16P51512 607 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 SLC36A3Q495N2 470 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 IQCF1Q8N6M8 205 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 ZNF283Q8N7M2 679 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 BHLHE23Q8NDY6 225 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 OR10G2Q8NGC3 310 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 CANT1Q8WVQ1 401 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 TMEM158Q8WZ71 300 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 RAB1CQ92928 201 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 TIMD4Q96H15 378 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 COG8Q96MW5 612 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 OR2V2Q96R30 315 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 GAL3ST1Q99999 423 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 CHID1Q9BWS9 393 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 HCAR1Q9BXC0 346 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 DYSFO75923 2080 aa13.58□□□□□ -0.24
CXXC1-209ENST00000587342 TRAV20A0A0B4J274 112 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 IGHV3-64DA0A0J9YX35 117 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 A0A1B0GWJ7 208 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 ISPDA4D126 451 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 SELEP16581 610 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 SPI1P17947 270 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 SRP14P37108 136 aaKnown RBP13.57□□□□□ -0.24
CXXC1-209ENST00000587342 GK2Q14410 553 aaPredicted RBP13.57□□□□□ -0.24
CXXC1-209ENST00000587342 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 ACSM5Q6NUN0 579 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 TRPM8Q7Z2W7 1104 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 HS3ST5Q8IZT8 346 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 ZNF511Q8NB15 262 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 OR8G5Q8NG78 346 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 OR2AJ1Q8NGZ0 328 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 OR2T4Q8NH00 348 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 SLC7A6OSQ96CW6 309 aaPredicted RBP13.57□□□□□ -0.24
CXXC1-209ENST00000587342 RAB39BQ96DA2 213 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 SLC30A2Q9BRI3 323 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 TMPRSS13Q9BYE2 586 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 DDX28Q9NUL7 540 aaKnown RBP13.57□□□□□ -0.24
CXXC1-209ENST00000587342 UBAP1Q9NZ09 502 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 IL19Q9UHD0 177 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 KCNG2Q9UJ96 466 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 NPTNQ9Y639 398 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 ARHGAP32A7KAX9 2087 aa13.57□□□□□ -0.24
CXXC1-209ENST00000587342 LOC105371242A0A075B767 164 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 IQCF6A8MYZ5 107 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 F5H5P2 479 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 PNPP00491 289 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 ZFP36P26651 326 aaKnown RBP13.56□□□□□ -0.24
CXXC1-209ENST00000587342 OTX1P32242 354 aaPredicted RBP13.56□□□□□ -0.24
CXXC1-209ENST00000587342 SLC25A1P53007 311 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 SEC61A1P61619 476 aaKnown RBP13.56□□□□□ -0.24
CXXC1-209ENST00000587342 ECH1Q13011 328 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 PCK2Q16822 640 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 SNAI3Q3KNW1 292 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 LINC01590Q5TEZ4 76 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 FAHD2BQ6P2I3 314 aaPredicted RBP13.56□□□□□ -0.24
CXXC1-209ENST00000587342 CD300LDQ6UXZ3 194 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 OR2T33Q8NG76 320 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 FAHD2AQ96GK7 314 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 MEGF10Q96KG7 1140 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 FEVQ99581 238 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 CDADC1Q9BWV3 514 aa13.56□□□□□ -0.24
CXXC1-209ENST00000587342 METTL17Q9H7H0 456 aaPredicted RBP13.56□□□□□ -0.24
CXXC1-209ENST00000587342 MED20Q9H944 212 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms