RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 IL17RELQ6ZVW7 336 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 C5orf24Q7Z6I8 188 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RNF130Q86XS8 419 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC22A18ASQ8N1D0 253 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CDRT4Q8N9R6 151 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4K14Q8NGD5 310 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5M9Q8NGP3 310 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IL1F10Q8WWZ1 152 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ST8SIA1Q92185 356 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MCHR2Q969V1 340 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ROPN1LQ96C74 230 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 BIRC8Q96P09 236 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TECTBQ96PL2 329 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM173AQ9BQD7 235 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 UTP23Q9BRU9 249 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MS4A8Q9BY19 250 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PRRG3Q9BZD7 231 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GPR61Q9BZJ8 451 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC19A3Q9BZV2 496 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RAB6CQ9H0N0 254 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 XKR8Q9H6D3 395 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 EXO5Q9H790 373 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CALHM2Q9HA72 323 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PRTFDC1Q9NRG1 225 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IMP3Q9NV31 184 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PTTG3PQ9NZH4 202 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PISDQ9UG56 409 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 NDUFAF1Q9Y375 327 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 BIRC6Q9NR09 4857 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PCM1Q15154 2024 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RIF1Q5UIP0 2472 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TCRBV9S1A1TA0A576 114 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 H0YL77 283 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 L7N2F9 121 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 GPR171O14626 319 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CASC3O15234 703 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1F1O43749 312 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SAP30O75446 220 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 HSBP1O75506 76 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 DCTN3O75935 186 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 GPR75O95800 540 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PTHP01270 115 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 FCER2P06734 321 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 FHP07954 510 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 NT5EP21589 574 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PDHA2P29803 388 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PPICP45877 212 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 FHITP49789 147 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SSR4P51571 173 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 NANOS2P60321 138 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF763Q0D2J5 394 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 KIAA0141Q14154 515 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SYPL1Q16563 259 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF770Q6IQ21 691 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ENPP6Q6UWR7 440 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 BTNL3Q6UXE8 466 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 LHFPL4Q7Z7J7 247 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CTAGE3PQ8IX95 158 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CLEC4FQ8N1N0 589 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 C17orf78Q8N4C9 275 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF441Q8N8Z8 693 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SNX31Q8N9S9 440 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR10V1Q8NGI7 309 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 AENQ8WTP8 325 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 C1orf54Q8WWF1 131 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MAGEB18Q96M61 343 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 HOPXQ9BPY8 73 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF717Q9BY31 904 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 NMUR2Q9GZQ4 415 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 LIME1Q9H400 295 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SYNDIG1Q9H7V2 258 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MTHFD2LQ9H903 347 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF160Q9HCG1 818 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 C1orf109Q9NX04 203 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MRPL39Q9NYK5 338 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TAS2R9Q9NYW1 312 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 VPS29Q9UBQ0 182 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ATPIF1Q9UII2 106 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CLEC4EQ9ULY5 219 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TRIOO75962 3097 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 LOC390937A0A1W2PQ73 354 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RAB19A4D1S5 217 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR6C70A6NIJ9 312 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZSCAN5BA6NJL1 495 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 K7ERQ8 282 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SDHDO14521 159 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ARPC3O15145 178 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 EMC8O43402 210 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RAD51CO43502 376 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 LMX1BO60663 402 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 EIF1BO60739 113 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RHBDL1O75783 438 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TSPAN12O95859 305 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CD48P09326 243 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ETS2P15036 469 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SDC1P18827 310 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CNR1P21554 472 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 UQCRC2P22695 453 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CCR7P32248 378 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RGRP47804 291 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms