RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FAM98BQ52LJ0 330 aaKnown RBP10.27□□□□□ -0.77
TOP3A-215ENST00000583328 FAM27BQ5VT28 67 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 RUSC1-AS1Q66K80 236 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 ATG16L2Q8NAA4 619 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 OR8B3Q8NGG8 313 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 LINC01006Q8NI28 216 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 TBC1D15Q8TC07 691 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 CMBLQ96DG6 245 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 NEIL1Q96FI4 390 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-215ENST00000583328 OR2V2Q96R30 315 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 OR8B2Q96RD0 313 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 SEPHS2Q99611 448 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 PRSS27Q9BQR3 290 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 ZNF426Q9BUY5 554 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 FNDC11Q9BVV2 318 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 IL1RAPQ9NPH3 570 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 INIPQ9NRY2 104 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 NDUFAF4Q9P032 175 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 STX18Q9P2W9 335 aaKnown RBP10.27□□□□□ -0.77
TOP3A-215ENST00000583328 ASH2LQ9UBL3 628 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 FAM32AQ9Y421 112 aaKnown RBP10.27□□□□□ -0.77
TOP3A-215ENST00000583328 POMT1Q9Y6A1 747 aa10.27□□□□□ -0.77
TOP3A-215ENST00000583328 J3KTA2 159 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 IFNL4K9M1U5 179 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 FFAR1O14842 300 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 ICMTO60725 284 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 CIB2O75838 187 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 CST2P09228 141 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 FUT1P19526 365 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 KITLGP21583 273 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 LAP3P28838 519 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 AQP2P41181 271 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 RBM34P42696 430 aaKnown RBP10.26□□□□□ -0.77
TOP3A-215ENST00000583328 YAP1P46937 504 aaKnown RBP10.26□□□□□ -0.77
TOP3A-215ENST00000583328 MMP16P51512 607 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 RPL15P61313 204 aaKnown RBP10.26□□□□□ -0.77
TOP3A-215ENST00000583328 FMODQ06828 376 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 TRAM2Q15035 370 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 SLC25A47Q6Q0C1 308 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 NLRC3Q7RTR2 1065 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 TSEN54Q7Z6J9 526 aaKnown RBP10.26□□□□□ -0.77
TOP3A-215ENST00000583328 SPATA24Q86W54 205 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 ZDHHC21Q8IVQ6 265 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 NPEPL1Q8NDH3 523 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 ZNF420Q8TAQ5 688 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-215ENST00000583328 SSMEM1Q8WWF3 244 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 DYRK2Q92630 601 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 HDAC2Q92769 488 aaKnown RBP10.26□□□□□ -0.77
TOP3A-215ENST00000583328 DACT3Q96B18 629 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-215ENST00000583328 POFUT1Q9H488 388 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 ANKRD19PQ9H560 264 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 SMURF2Q9HAU4 748 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 GCM1Q9NP62 436 aa10.26□□□□□ -0.77
TOP3A-215ENST00000583328 NDRG4Q9ULP0 352 aaKnown RBP10.26□□□□□ -0.77
TOP3A-215ENST00000583328 TCRBV3S1A0A5B6 114 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 DHRS12A0PJE2 317 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 C3orf80F5H4A9 247 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 CYB5R3P00387 301 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-215ENST00000583328 RAP2AP10114 183 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 NR2C1P13056 603 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 TUBG1P23258 451 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 MAGEA2P43356 314 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 PITPNBP48739 271 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 PROK1P58294 105 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 ZSCAN26Q16670 478 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 C2orf68Q2NKX9 166 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 ARMC4Q5T2S8 1044 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 C1orf146Q5VVC0 180 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 NKAIN4Q8IVV8 208 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 ADGRG5Q8IZF4 528 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 UTP4Q969X6 686 aaKnown RBP10.25□□□□□ -0.77
TOP3A-215ENST00000583328 NMD3Q96D46 503 aaKnown RBP10.25□□□□□ -0.77
TOP3A-215ENST00000583328 DHRS1Q96LJ7 313 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 RAB3IPQ96QF0 476 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-215ENST00000583328 RBP7Q96R05 134 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 TMEM246Q9BRR3 403 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 PCGF1Q9BSM1 259 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 TUBG2Q9NRH3 451 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 TBCCD1Q9NVR7 557 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 KIF17Q9P2E2 1029 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 RHCGQ9UBD6 479 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 CLN8Q9UBY8 286 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 STARD10Q9Y365 291 aa10.25□□□□□ -0.77
TOP3A-215ENST00000583328 A0A1W2PRQ8 180 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 G3V4G9 280 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 P2RY10O00398 339 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 TNFRSF13BO14836 293 aaPredicted RBP10.24□□□□□ -0.77
TOP3A-215ENST00000583328 PIN1P1O15428 100 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 GPR137BO60478 399 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 OR7A10O76100 309 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 DIRAS1O95057 198 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 IGF2P01344 180 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 H1F0P07305 194 aaKnown RBP10.24□□□□□ -0.77
TOP3A-215ENST00000583328 CSF1P09603 554 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 SMIM11AP58511 58 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 DGCR6Q14129 220 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 VASH1Q7L8A9 365 aaPredicted RBP10.24□□□□□ -0.77
TOP3A-215ENST00000583328 OR5AS1Q8N127 324 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 MOSPD2Q8NHP6 518 aa10.24□□□□□ -0.77
TOP3A-215ENST00000583328 TMEM255BQ8WV15 326 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms