RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 DEFB119Q8N690 84 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 OR4F15Q8NGB8 312 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 OR8D1Q8WZ84 308 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 NAT6Q93015 286 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 NTAN1Q96AB6 310 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 OMDQ99983 421 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 OSBPL11Q9BXB4 747 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 CLCF1Q9UBD9 225 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 ZNF629Q9UEG4 869 aaPredicted RBP1.89□□□□□ -2.11
COPS3-217ENST00000583160 OR12D3Q9UGF7 316 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 PCYOX1Q9UHG3 505 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 PPIL1Q9Y3C6 166 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 DOPEY2Q9Y3R5 2298 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 ANKRD12Q6UB98 2062 aa1.89□□□□□ -2.11
COPS3-217ENST00000583160 SETXQ7Z333 2677 aaKnown RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 G3V4G9 280 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 M0QYV0 167 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 RAD51BO15315 384 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 RS1O15537 224 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 AQP9O43315 295 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 KDELR3O43731 214 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 SMC2O95347 1197 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 FGFR1OPO95684 399 aaKnown RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 LSM8O95777 96 aaKnown RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 IL1BP01584 269 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 APOEP02649 317 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 TLX1NBP0CAT3 122 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 PGAM1P18669 254 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 CALCRP30988 508 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 BTCP35070 178 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 ADRA1AP35348 466 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 HCAR3P49019 387 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 SPIBQ01892 262 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 GNA12Q03113 381 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 PNOCQ13519 176 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 KIAA0087Q14695 138 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 ELOCQ15369 112 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 EXOC3L4Q17RC7 722 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 LINC00303Q3SY05 128 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 BCL7AQ4VC05 210 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 CARD16Q5EG05 197 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 RAET1GQ6H3X3 334 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 C22orf39Q6P5X5 142 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 LRRC8BQ6P9F7 803 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 Q6ZSR6 202 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 NEGR1Q7Z3B1 354 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 CALHM3Q86XJ0 350 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 PGAM4Q8N0Y7 254 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 DEFB106AQ8N104 65 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 UMODL1-AS1Q8N2C9 162 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 EID2Q8N6I1 236 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 UBA3Q8TBC4 463 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 ECHDC3Q96DC8 303 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 RPRD1AQ96P16 312 aaPredicted RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 ALG12Q9BV10 488 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 ZYG11BQ9C0D3 744 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 DNTTIP1Q9H147 329 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 NXF5Q9H1B4 397 aaKnown RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 SAMSN1Q9NSI8 373 aaKnown RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 TBK1Q9UHD2 729 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 RWDD2AQ9UIY3 292 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 HOOK1Q9UJC3 728 aaKnown RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 STAP1Q9ULZ2 295 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 MAST4O15021 2626 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 UBR5O95071 2799 aaPredicted RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 TNRC6AQ8NDV7 1962 aaKnown RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 POLEQ07864 2286 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 ZNF106Q9H2Y7 1883 aaKnown RBP1.88□□□□□ -2.11
COPS3-217ENST00000583160 SHANK1Q9Y566 2161 aa1.88□□□□□ -2.11
COPS3-217ENST00000583160 COL12A1Q99715 3063 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 ESPL1Q14674 2120 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 ICE1Q9Y2F5 2266 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 HIVEP3Q5T1R4 2406 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 A0A0D9SEW6 157 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 SIGLEC16A6NMB1 481 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 D6RAR5 112 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PSMD11O00231 422 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 TOX3O15405 576 aaPredicted RBP1.87□□□□□ -2.11
COPS3-217ENST00000583160 TM7SF2O76062 418 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PRB1P04280 392 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 LIPCP11150 499 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 GZMAP12544 262 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 HPGDP15428 266 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PSMA2P25787 234 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 OR1E1P30953 314 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PSMD8P48556 350 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 CCNHP51946 323 aaPredicted RBP1.87□□□□□ -2.11
COPS3-217ENST00000583160 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 CACNG7P62955 275 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 NUCB2P80303 420 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 SEMG2Q02383 582 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 REG3AQ06141 175 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 RAD51Q06609 339 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 ELP6Q0PNE2 266 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 STK11Q15831 433 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PARP15Q460N3 678 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PTPN20Q4JDL3 420 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 TPRG1LQ5T0D9 272 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 TENM4Q6N022 2769 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PPP1R2P3Q6NXS1 205 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms