RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	CACNG2	Q9Y698	323 aa		6.54	□□□□□ -1.36
NF1-222	ENST00000582892	VWF	P04275	2813 aa		6.54	□□□□□ -1.36
NF1-222	ENST00000582892	FREM1	Q5H8C1	2179 aa		6.54	□□□□□ -1.36
NF1-222	ENST00000582892	ALPK2	Q86TB3	2170 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892		A0A0G2JMP0	313 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892		A0A0X1KG70	313 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892		A0A1W2PQD3	144 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	ZC3H12D	A2A288	527 aa	Known RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	NAP1L6	A6NFF2	107 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	FRG2C	A6NGY1	282 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892		A8MUA0	341 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	EEF1E1-BLOC1S5	C9J1V9	151 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	MCIDAS	D6RGH6	385 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	LRRN3	E7EW58	273 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	KLRC4-KLRK1	H3BQV0	150 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	PHYH	O14832	338 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	EEF1E1	O43324	174 aa	Known RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	PRKN	O60260	465 aa	Predicted RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	FZD7	O75084	574 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	NCR1	O76036	304 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	GLS	O94925	669 aa	Predicted RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	IGHG3	P01860	377 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	CLPS	P04118	112 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	EIF4E	P06730	217 aa	Known RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	CD14	P08571	375 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	UBL4A	P11441	157 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	RAC2	P15153	192 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	SPI1	P17947	270 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	CFP	P27918	469 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	NKX2-5	P52952	324 aa	Predicted RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	SLC16A1	P53985	500 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	RPS11	P62280	158 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	SLC3A1	Q07837	685 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	FAP	Q12884	760 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	SKP2	Q13309	424 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	ZNF267	Q14586	743 aa	Predicted RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	INSL4	Q14641	139 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	NSDHL	Q15738	373 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	CEP78	Q5JTW2	689 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	UBE2NL	Q5JXB2	153 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	FAM69A	Q5T7M9	428 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	CD276	Q5ZPR3	534 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	ZNF57	Q68EA5	555 aa	Predicted RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	SLC16A9	Q7RTY1	509 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	CADM2	Q8N3J6	435 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	ZNF614	Q8N883	585 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	OR4M2	Q8NGB6	313 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	OR52E2	Q8NGJ4	325 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	OR5J2	Q8NH18	312 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	SMIM4	Q8WVI0	70 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	UPRT	Q96BW1	309 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	PEX11G	Q96HA9	241 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	ART5	Q96L15	291 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	HYLS1	Q96M11	299 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	PTCHD1	Q96NR3	888 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	OR2M2	Q96R28	347 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	TBX5	Q99593	518 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	LPAR4	Q99677	370 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	LAT2	Q9GZY6	243 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	HDHD2	Q9H0R4	259 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	ABCG5	Q9H222	651 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	DPAGT1	Q9H3H5	408 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	MARCH7	Q9H992	704 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	RANGRF	Q9HD47	186 aa	Predicted RBP	6.53	□□□□□ -1.36
NF1-222	ENST00000582892	EMC7	Q9NPA0	242 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	ACOXL	Q9NUZ1	547 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	NLK	Q9UBE8	527 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	B4GALT7	Q9UBV7	327 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	ZNF281	Q9Y2X9	895 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	OR10H1	Q9Y4A9	318 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	IER3IP1	Q9Y5U9	82 aa		6.53	□□□□□ -1.36
NF1-222	ENST00000582892	IGKV1D-42	A0A075B6H8	117 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	IGKV3D-11	A0A0A0MRZ8	115 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892		A0A1B0GVI7	797 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	LINC00854	A0A1B0GVQ3	168 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	SMIM30	A4D0T7	59 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	AIP	O00170	330 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	DVL2	O14641	736 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	T	O15178	435 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	EIF4E2	O60573	245 aa	Known RBP	6.52	□□□□□ -1.37
NF1-222	ENST00000582892	PRAF2	O60831	178 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	WDR1	O75083	606 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	ECD	O95905	644 aa	Predicted RBP	6.52	□□□□□ -1.37
NF1-222	ENST00000582892	MRPL3	P09001	348 aa	Known RBP	6.52	□□□□□ -1.37
NF1-222	ENST00000582892	ASAH2B	P0C7U1	165 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	CALCB	P10092	127 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	EDNRA	P25101	427 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	SDHA	P31040	664 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	CEACAM8	P31997	349 aa	Predicted RBP	6.52	□□□□□ -1.37
NF1-222	ENST00000582892	RPL4	P36578	427 aa	Known RBP	6.52	□□□□□ -1.37
NF1-222	ENST00000582892	GDNF	P39905	211 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	DNASE1L1	P49184	302 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	BLVRA	P53004	296 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	SLC37A1	P57057	533 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	AP3S2	P59780	193 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	ZNF74	Q16587	644 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	NTRK2	Q16620	822 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	CHRFAM7A	Q494W8	412 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	SLC36A2	Q495M3	483 aa		6.52	□□□□□ -1.37
NF1-222	ENST00000582892	LINC01590	Q5TEZ4	76 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms