RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CAMK2AQ9UQM7 478 aa9□□□□□ -0.97
SS18-221ENST00000582448 EML6Q6ZMW3 1958 aa9□□□□□ -0.97
SS18-221ENST00000582448 MAP1AP78559 2803 aaPredicted RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 LOC102725191A0A1B0GVB3 256 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 A0A1W2PQL4 384 aaPredicted RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 SLC22A23A1A5C7 686 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 AQP7P3A6NL99 342 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 B4DXG7 233 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 MS4A18H0YCH9 400 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 CASKO14936 926 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 EFNA2O43921 213 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ZIC3O60481 467 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 TMCC2O75069 709 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 SERPINA3P01011 423 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 IGHG1P01857 330 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 OPN1LWP04000 364 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 KRT8P05787 483 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ADRA2AP08913 450 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ZNF823P16415 610 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 NAT1P18440 290 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 CELP19835 753 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 CEACAM8P31997 349 aaPredicted RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 PYCR1P32322 319 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 TIMP3P35625 211 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 RPS3AP61247 264 aaKnown RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 NCS1P62166 190 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 RUNX1T1Q06455 604 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 DBPQ10586 325 aaPredicted RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 MELKQ14680 651 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 MS4A18Q3C1V0 323 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ACSF3Q4G176 576 aaPredicted RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 Q5PR19 223 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ZNF544Q6NX49 715 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 LUZP2Q86TE4 346 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 YRDCQ86U90 279 aaKnown RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 NDNFQ8TB73 568 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ZPLD1Q8TCW7 415 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ASB10Q8WXI3 467 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ASB17Q8WXJ9 295 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 RPL3LQ92901 407 aaKnown RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 C4orf36Q96KX1 117 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 Q96MF0 132 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 TIMP4Q99727 224 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 OR2B2Q9GZK3 357 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 NUAK2Q9H093 628 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 OR51E2Q9H255 320 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 KCNN2Q9H2S1 579 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ZNF703Q9H7S9 590 aaPredicted RBP8.99□□□□□ -0.97
SS18-221ENST00000582448 WDR76Q9H967 626 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 SIAEQ9HAT2 523 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 ATP23Q9Y6H3 246 aa8.99□□□□□ -0.97
SS18-221ENST00000582448 LRRC3CA6NJW4 275 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 SELENOFO60613 162 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 SMPD2O60906 423 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 FZD7O75084 574 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 KHDRBS3O75525 346 aaKnown RBP8.98□□□□□ -0.97
SS18-221ENST00000582448 CLPXO76031 633 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 HRGP04196 525 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 GALP22466 123 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 CTSSP25774 331 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 GUCA1AP43080 201 aaPredicted RBP8.98□□□□□ -0.97
SS18-221ENST00000582448 BIDP55957 195 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 CARD18P57730 90 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 AQP6Q13520 282 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 SSX1Q16384 188 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 ZNF239Q16600 458 aaKnown RBP8.98□□□□□ -0.97
SS18-221ENST00000582448 FBXL19-AS1Q494R0 122 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 CCDC58Q4VC31 144 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 THEM4Q5T1C6 240 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 HBMQ6B0K9 141 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 LINC00299Q6ZSB3 139 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 ESPNLQ6ZVH7 1005 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 ZBTB46Q86UZ6 589 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 OR6V1Q8N148 313 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 KDM8Q8N371 416 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 FAM83FQ8NEG4 500 aaPredicted RBP8.98□□□□□ -0.97
SS18-221ENST00000582448 OR10H5Q8NGA6 315 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 OR6N2Q8NGY6 317 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 ZFAND2BQ8WV99 257 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 SLC25A44Q96H78 314 aaPredicted RBP8.98□□□□□ -0.97
SS18-221ENST00000582448 KCTD7Q96MP8 289 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 TSSK2Q96PF2 358 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 RBM24Q9BX46 236 aaKnown RBP8.98□□□□□ -0.97
SS18-221ENST00000582448 ISG20L2Q9H9L3 353 aaKnown RBP8.98□□□□□ -0.97
SS18-221ENST00000582448 ACKR4Q9NPB9 350 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 QPCTLQ9NXS2 382 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 GNG8Q9UK08 70 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 B9D1Q9UPM9 204 aa8.98□□□□□ -0.97
SS18-221ENST00000582448 PNMA8CA0A1B0GUJ8 204 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 TRDV1A0A1B0GX56 115 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 A0A1W2PPR1 153 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 TVP23AA6NH52 213 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 METTL15A6NJ78 407 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 TFP02787 698 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 HPNP05981 417 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 HLA-DOBP13765 273 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 ENPP1P22413 925 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 S100A5P33763 92 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 RAC3P60763 192 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms