RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 LAMB1P07942 1786 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 IL5P05113 134 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 CTSLP07711 333 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 NTF3P20783 257 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 TPPP2P59282 170 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 CISD2Q8N5K1 135 aaKnown RBP13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC17A4Q9Y2C5 497 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 HS3ST3A1Q9Y663 406 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 A0A1B0GX78 115 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 H3BNC9 293 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 SH2D1BO14796 132 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 YKT6O15498 198 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 SELENBP1Q13228 472 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 TMEM88Q6PEY1 159 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 OR10P1Q8NGE3 313 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 OR4C16Q8NGL9 310 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 PBOV1Q9GZY1 135 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 RIMS4Q9H426 269 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 GNB4Q9HAV0 340 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 RHOFQ9HBH0 211 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC23A1Q9UHI7 598 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 DAPP1Q9UN19 280 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 KLKB1P03952 638 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 QDPRP09417 244 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 OR8G1Q15617 311 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 PTOV1Q86YD1 416 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 AGBL5Q8NDL9 886 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 MARCH1Q8TCQ1 289 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 RPUSD4Q96CM3 377 aaKnown RBP13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 CMTM3Q96MX0 182 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 ZNF230Q9UIE0 474 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 SH3BGRL2Q9UJC5 107 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 H3BQ06 376 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 CXCL12P48061 93 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 MLF1P58340 268 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC38A6Q8IZM9 456 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 MAP6Q96JE9 813 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 ZDHHC5Q9C0B5 715 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 CDCP1Q9H5V8 836 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 BCL2L10Q9HD36 194 aa13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 GDF2Q9UK05 429 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-217ENST00000581241 LRRC30A6NM36 301 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 DCTDP32321 178 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 CSN1S1P47710 185 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SCCPDHQ8NBX0 429 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 ARHGDIGQ99819 225 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 TOLLIPQ9H0E2 274 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 MMP26Q9NRE1 261 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 TARM1B6A8C7 271 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC31A2O15432 143 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC17A1Q14916 467 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 C11orf87Q6NUJ2 197 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 TAAR6Q96RI8 345 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 POMT2Q9UKY4 750 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 ZNF749O43361 778 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 IAPPP10997 89 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC25A6P12236 298 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 TPBGQ13641 420 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC25A35Q3KQZ1 300 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 LAIR1Q6GTX8 287 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 BATF2Q8N1L9 274 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 GALNT16Q8N428 558 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SMIM4Q8WVI0 70 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 BOD1Q96IK1 185 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 CXorf58Q96LI9 332 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SMIM7Q9BQ49 75 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 PDFQ9HBH1 243 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 TNFRSF12AQ9NP84 129 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 FOXJ3Q9UPW0 622 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 TIMM10BQ9Y5J6 103 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SDCBPO00560 298 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 EPXP11678 715 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 RPL18Q07020 188 aaKnown RBP13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 ACKR1Q16570 336 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 PRSS36Q5K4E3 855 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SH2D5Q6ZV89 423 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 CDC20BQ86Y33 519 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 ADGRG3Q86Y34 549 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 PPP1R1CQ8WVI7 109 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 GINS3Q9BRX5 216 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC5A6Q9Y289 635 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 EMDP50402 254 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 GPNMBQ14956 572 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 ELAVL1Q15717 326 aaKnown RBP13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 PNLIPRP3Q17RR3 467 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 ARIH2OSQ8N7S6 290 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 WFDC5Q8TCV5 224 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 RLN3Q8WXF3 142 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 C12orf49Q9H741 205 aa13.22□□□□□ -0.29
CSNK1D-217ENST00000581241 PRSS37A4D1T9 235 aa13.21□□□□□ -0.29
CSNK1D-217ENST00000581241 RNASEK-C17orf49H0YIS7 233 aa13.21□□□□□ -0.29
CSNK1D-217ENST00000581241 J3QR89 54 aa13.21□□□□□ -0.29
CSNK1D-217ENST00000581241 AQP8O94778 261 aa13.21□□□□□ -0.29
CSNK1D-217ENST00000581241 CLEC3BP05452 202 aa13.21□□□□□ -0.29
CSNK1D-217ENST00000581241 CD1CP29017 333 aa13.21□□□□□ -0.29
CSNK1D-217ENST00000581241 VAMP3Q15836 100 aa13.21□□□□□ -0.29
CSNK1D-217ENST00000581241 WDR89Q96FK6 387 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms