RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.38□□□□□ -0.43
SKA2-205ENST00000580541 TMEM269A0A1B0GVZ9 245 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 TMEM129A0AVI4 362 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 DPRXA6NFQ7 191 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 J3QLW9 94 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 ABCD4O14678 606 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 ZNF35P13682 527 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 ZNF19P17023 458 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 OTX1P32242 354 aaPredicted RBP12.38□□□□□ -0.43
SKA2-205ENST00000580541 UCP2P55851 309 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 ZNF85Q03923 595 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 BSPH1Q075Z2 132 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 MALLQ13021 153 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 OR10S1Q8NGN2 331 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 OR52N1Q8NH53 320 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 ITFG2Q969R8 447 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 APOBEC3DQ96AK3 386 aaPredicted RBP12.38□□□□□ -0.43
SKA2-205ENST00000580541 PSMG3-AS1Q96PY0 264 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 POU2F3Q9UKI9 436 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 KLHDC2Q9Y2U9 406 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 RNF115Q9Y4L5 304 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 LRP12Q9Y561 859 aa12.38□□□□□ -0.43
SKA2-205ENST00000580541 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
SKA2-205ENST00000580541 LRRK2Q5S007 2527 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 IGHV2OR16-5A0A0B4J2B6 119 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 ICMTO60725 284 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 LCATP04180 440 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 ANXA2P07355 339 aaKnown RBP12.37□□□□□ -0.43
SKA2-205ENST00000580541 CELA3BP08861 270 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 ACSM4P0C7M7 580 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 LIMS3P0CW19 117 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 LIMS4P0CW20 117 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 PSKH1P11801 424 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 NR4A1P22736 598 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 C21orf33P30042 268 aaPredicted RBP12.37□□□□□ -0.43
SKA2-205ENST00000580541 CX3CR1P49238 355 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 ETV1P50549 477 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 MMP16P51512 607 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 PRKXP51817 358 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 SELENOVP59797 346 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 KRTAP27-1Q3LI81 207 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 LIPNQ5VXI9 398 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 PIK3IP1Q96FE7 263 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 AMELYQ99218 206 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 DOK1Q99704 481 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 MOB1AQ9H8S9 216 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 BABAM2Q9NXR7 383 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 ERVK-18Q9QC07 812 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 MRM2Q9UI43 246 aaKnown RBP12.37□□□□□ -0.43
SKA2-205ENST00000580541 ZNF391Q9UJN7 358 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 ICE1Q9Y2F5 2266 aa12.37□□□□□ -0.43
SKA2-205ENST00000580541 PKDREJQ9NTG1 2253 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 FASNP49327 2511 aaKnown RBP12.36□□□□□ -0.43
SKA2-205ENST00000580541 CADP27708 2225 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 A6NNC1 897 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 PSMD9O00233 223 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 DBHP09172 617 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 CCL2P13500 99 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 CFL1P23528 166 aaKnown RBP12.36□□□□□ -0.43
SKA2-205ENST00000580541 WNT4P56705 351 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 OR12D2P58182 307 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 TAS2R43P59537 309 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 PSMA6P60900 246 aaKnown RBP12.36□□□□□ -0.43
SKA2-205ENST00000580541 CCDC58Q4VC31 144 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 TP53I3Q53FA7 332 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 ZNF684Q5T5D7 378 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 SSX6Q7RTT6 188 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 NANOGP1Q8N7R0 232 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 NUP37Q8NFH4 326 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 PGAM5Q96HS1 289 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 C4orf36Q96KX1 117 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 C1QTNF5Q9BXJ0 243 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 OR10A2Q9H208 303 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 RGCCQ9H4X1 137 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 TRIM36Q9NQ86 728 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 PLEKHB1Q9UF11 243 aaPredicted RBP12.36□□□□□ -0.43
SKA2-205ENST00000580541 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 R4GMQ9 66 aa12.36□□□□□ -0.43
SKA2-205ENST00000580541 DOPEY2Q9Y3R5 2298 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 A0A087WXM4 84 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 DEFB108AA8MXU0 73 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 LOC110117498-PIK3R3F6TDL0 507 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 H3BSA7 217 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 XRCC2O43543 280 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 RPP14O95059 124 aaKnown RBP12.35□□□□□ -0.43
SKA2-205ENST00000580541 ATE1O95260 518 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 LCKP06239 509 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 HTR1AP08908 422 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 GLRXP35754 106 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
SKA2-205ENST00000580541 MVKQ03426 396 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 MOGQ16653 247 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
SKA2-205ENST00000580541 ZNF718Q3SXZ3 478 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 ABHD4Q8TB40 342 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 SLC7A6Q92536 515 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 FCGR1BQ92637 280 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 RHNO1Q9BSD3 238 aa12.35□□□□□ -0.43
SKA2-205ENST00000580541 TTTY10Q9BZA0 68 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms