RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SLC35D3Q5M8T2 416 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 NAA40Q86UY6 237 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 BBS1Q8NFJ9 593 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 OR5L1Q8NGL2 311 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 GTF3AQ92664 365 aaKnown RBP16.48■□□□□ 0.23
SS18-208ENST00000577751 CMBLQ96DG6 245 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 INTS14Q96SY0 518 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 PURGQ9UJV8 347 aaKnown RBP16.48■□□□□ 0.23
SS18-208ENST00000577751 SAC3D1A6NKF1 404 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 F5H5K5 113 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 NCR1O76036 304 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 MT-ND5P03915 603 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 ADH4P08319 380 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 RAC2P15153 192 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 NR4A2P43354 598 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 ZNF81P51508 661 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 MRPS11P82912 194 aaKnown RBP16.47■□□□□ 0.23
SS18-208ENST00000577751 RIN1Q13671 783 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 C12orf73Q69YU5 71 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 CLEC9AQ6UXN8 241 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 FBXW12Q6X9E4 464 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 CXXC5Q7LFL8 322 aaKnown RBP16.47■□□□□ 0.23
SS18-208ENST00000577751 DPY19L4Q7Z388 723 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 ERI1Q8IV48 349 aaKnown RBP16.47■□□□□ 0.23
SS18-208ENST00000577751 OR6N2Q8NGY6 317 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 SPTSSAQ969W0 71 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 SLAMF6Q96DU3 332 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 ZMYND19Q96E35 227 aaPredicted RBP16.47■□□□□ 0.23
SS18-208ENST00000577751 RBM4BQ9BQ04 359 aaKnown RBP16.47■□□□□ 0.23
SS18-208ENST00000577751 S100A14Q9HCY8 104 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 CYSLTR2Q9NS75 346 aa16.47■□□□□ 0.23
SS18-208ENST00000577751 PLSCR5A0PG75 271 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 ZSCAN5BA6NJL1 495 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 PRKYO43930 277 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 HEXAP06865 529 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 COL8A2P25067 703 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 POLR2IP36954 125 aaKnown RBP16.46■□□□□ 0.23
SS18-208ENST00000577751 TPTEP56180 551 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 KRTAP1-1Q07627 177 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 KLHL12Q53G59 568 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 RHOUQ7L0Q8 258 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 SHFQ7M4L6 423 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 ZNF540Q8NDQ6 660 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 RDH5Q92781 318 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 TEAD3Q99594 435 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 PIMREGQ9BSJ6 248 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 GABARAPL3Q9BY60 117 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 PRRG3Q9BZD7 231 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 PTTG3PQ9NZH4 202 aa16.46■□□□□ 0.23
SS18-208ENST00000577751 ZNF878C9JN71 531 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 LYNX1G3V0Z9 82 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 M0R135 149 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 TIMM8AO60220 97 aaPredicted RBP16.45■□□□□ 0.22
SS18-208ENST00000577751 IGHV1-46P01743 117 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 ALPLP05186 524 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 LYNX1P0DP58 116 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 CCL8P80075 99 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 EIF2B1Q14232 305 aaKnown RBP16.45■□□□□ 0.22
SS18-208ENST00000577751 HLXQ14774 488 aaPredicted RBP16.45■□□□□ 0.22
SS18-208ENST00000577751 CARTPTQ16568 116 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 FAM209AQ5JX71 171 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 DRAM2Q6UX65 266 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 OTOSQ8NHW6 89 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 RNF133Q8WVZ7 376 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 YIPF5Q969M3 257 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 ZNF799Q96GE5 643 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 KCNJ15Q99712 375 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 ABHD6Q9BV23 337 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 BPESC1Q9GZL8 116 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 CENPMQ9NSP4 180 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 USE1Q9NZ43 259 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 ZDHHC8Q9ULC8 765 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 MTORP42345 2549 aa16.45■□□□□ 0.22
SS18-208ENST00000577751 SELENOFO60613 162 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 LCATP04180 440 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 ACHEP22303 614 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 USF1P22415 310 aaPredicted RBP16.44■□□□□ 0.22
SS18-208ENST00000577751 CDK5R2Q13319 367 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 APOFQ13790 326 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 ZMAT1Q5H9K5 638 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 Q6ZR03 302 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 TCEANCQ8N8B7 351 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 TMEM163Q8TC26 289 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 DIRC2Q96SL1 478 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 AMELYQ99218 206 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 COPS4Q9BT78 406 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 CHODLQ9H9P2 273 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 MSL2Q9HCI7 577 aa16.44■□□□□ 0.22
SS18-208ENST00000577751 ZANQ9Y493 2812 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 CCDC182A6NF36 153 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 SPRY3O43610 288 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 TLX2O43763 284 aaPredicted RBP16.43■□□□□ 0.22
SS18-208ENST00000577751 RP2O75695 350 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 CD55P08174 381 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 ANOS1P23352 680 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 CRYBB2P43320 205 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 SLC15A1P46059 708 aa16.43■□□□□ 0.22
SS18-208ENST00000577751 GRB2P62993 217 aaKnown RBP16.43■□□□□ 0.22
SS18-208ENST00000577751 TSTQ16762 297 aaKnown RBP16.43■□□□□ 0.22
SS18-208ENST00000577751 AADACL4Q5VUY2 407 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms