RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PSMD9O00233 223 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 ZNF254O75437 659 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 FADS2O95864 444 aaKnown RBP12.04□□□□□ -0.48
RPAIN-217ENST00000575711 NGFP01138 241 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 LCATP04180 440 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 OR4A8P0C604 315 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 TUBG1P23258 451 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 MYF6P23409 242 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 SERPINF1P36955 418 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 CX3CR1P49238 355 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 ERVS71-1P61550 626 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 PPP1CBP62140 327 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 ROM1Q03395 351 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 EGR3Q06889 387 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 ADIPOQQ15848 244 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 AGAP6Q5VW22 663 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 PAMR1Q6UXH9 720 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 ZNF679Q8IYX0 411 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 RFLNBQ8N5W9 214 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 OR5L1Q8NGL2 311 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 NRGNQ92686 78 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 MRPL24Q96A35 216 aaKnown RBP12.04□□□□□ -0.48
RPAIN-217ENST00000575711 OR8B4Q96RC9 309 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 DOK1Q99704 481 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 PLK3Q9H4B4 646 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 Q9H521 79 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 TUBG2Q9NRH3 451 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 MRPS18AQ9NVS2 196 aaKnown RBP12.04□□□□□ -0.48
RPAIN-217ENST00000575711 SLCO1C1Q9NYB5 712 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 LRP12Q9Y561 859 aa12.04□□□□□ -0.48
RPAIN-217ENST00000575711 DAPL1A0PJW8 107 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 J3QRE1 110 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 DANCRP0C864 163 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 GCH1P30793 250 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 RIDAP52758 137 aaKnown RBP12.03□□□□□ -0.48
RPAIN-217ENST00000575711 SELENOVP59797 346 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 ZNF718Q3SXZ3 478 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 SPATA46Q5T0L3 261 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 COLCA1Q6ZS62 124 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 SSX6Q7RTT6 188 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 NAA40Q86UY6 237 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 ACBD7Q8N6N7 88 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 OR52I1Q8NGK6 324 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 SYNPRQ8TBG9 265 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 SLC25A40Q8TBP6 338 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 SNX33Q8WV41 574 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 MRPL48Q96GC5 212 aaKnown RBP12.03□□□□□ -0.48
RPAIN-217ENST00000575711 CNBD2Q96M20 576 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 MYCBPQ99417 103 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-217ENST00000575711 CCL19Q99731 98 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 C1QTNF5Q9BXJ0 243 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 OR2J1Q9GZK6 312 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 LIME1Q9H400 295 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 SP140LQ9H930 580 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 CBLN4Q9NTU7 201 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 FZR1Q9UM11 496 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 LAMP3Q9UQV4 416 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 CRYBG3Q68DQ2 2970 aa12.03□□□□□ -0.48
RPAIN-217ENST00000575711 NBPF19A0A087WUL8 3843 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 PRR32B1ATL7 298 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 B9A039 149 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 H3BSA7 217 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 FAM20BO75063 409 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 RAF1P04049 648 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 KRT8P05787 483 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 ANXA2P07355 339 aaKnown RBP12.02□□□□□ -0.49
RPAIN-217ENST00000575711 SOD3P08294 240 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 SLC2A1P11166 492 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 ZNF121P58317 390 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-217ENST00000575711 PSMA6P60900 246 aaKnown RBP12.02□□□□□ -0.49
RPAIN-217ENST00000575711 CSNK2BP67870 215 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 ZNF85Q03923 595 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 MALLQ13021 153 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 EFNB3Q15768 340 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 ZNF829Q3KNS6 432 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-217ENST00000575711 FAM220AQ7Z4H9 259 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 BPIFB6Q8NFQ5 453 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 KLF14Q8TD94 323 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-217ENST00000575711 PIGTQ969N2 578 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 MARS2Q96GW9 593 aaKnown RBP12.02□□□□□ -0.49
RPAIN-217ENST00000575711 SYT3Q9BQG1 590 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 TRAF4Q9BUZ4 470 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-217ENST00000575711 INPP5EQ9NRR6 644 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 PTTG3PQ9NZH4 202 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 DUSP13Q9UII6 198 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 ST6GALNAC2Q9UJ37 374 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 MYRFQ9Y2G1 1151 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 PLEKHA6Q9Y2H5 1048 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 STARD10Q9Y365 291 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 N6AMT1Q9Y5N5 214 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 CADP27708 2225 aa12.02□□□□□ -0.49
RPAIN-217ENST00000575711 ABCA4P78363 2273 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 A0A1W2PPW3 197 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 EFCAB10A6NFE3 127 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 METTL15A6NJ78 407 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 XPNPEP2O43895 674 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 SULT1C4O75897 302 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 ATE1O95260 518 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 IGHA1P01876 353 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms