RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 MOGAT3Q86VF5 341 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 ARHGAP24Q8N264 748 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 PIP4P2Q8N4L2 257 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 NKAIN3Q8N8D7 197 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 PAPD5Q8NDF8 572 aaKnown RBP4.85□□□□□ -1.63
SMG6-219ENST00000575663 OR10AD1Q8NGE0 317 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 OR8H1Q8NGG4 311 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 OR11L1Q8NGX0 322 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 AKR7LQ8NHP1 331 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 RP9Q8TA86 221 aaKnown RBP4.85□□□□□ -1.63
SMG6-219ENST00000575663 NSMAFQ92636 917 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 NSL1Q96IY1 281 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 ZNF347Q96SE7 839 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 ZNF607Q96SK3 696 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 TMEM43Q9BTV4 400 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 NPFFR1Q9GZQ6 430 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 FAM234AQ9H0X4 552 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 SIRPDQ9H106 197 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 CNTD2Q9H8S5 307 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 TMEM27Q9HBJ8 222 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 PALMDQ9NP74 551 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 TRIM36Q9NQ86 728 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 FKBP14Q9NWM8 211 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 STX18Q9P2W9 335 aaKnown RBP4.85□□□□□ -1.63
SMG6-219ENST00000575663 SIGLEC9Q9Y336 463 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 CHST2Q9Y4C5 530 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 KPTNQ9Y664 436 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 GMEB1Q9Y692 573 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 ARHGAP32A7KAX9 2087 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 A0A0B4J2E0 115 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 LCE6AA0A183 80 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 A0A1B0GX12 115 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 A0A1W2PRG6 482 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 C5orf58C9J3I9 102 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 LRRN3E7EW58 273 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 H3BUX3 64 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 SDHDO14521 159 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 RFXANKO14593 260 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 UBDO15205 165 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 DNAJC8O75937 253 aaPredicted RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 INMTO95050 263 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 ANP32DO95626 131 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CLIC3O95833 236 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 ECDO95905 644 aaPredicted RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 C1QCP02747 245 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 HIST1H2ABP04908 130 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CD28P10747 220 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 UMPSP11172 480 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 ETFAP13804 333 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 FAHP16930 419 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 LBPP18428 481 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 SLC6A2P23975 617 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 LMO1P25800 156 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 HTR2AP28223 471 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 PRKAR1BP31321 381 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CDAP32320 146 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 MSX2P35548 267 aaPredicted RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 PSMB10P40306 273 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CDKN2CP42773 168 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 DAP3P51398 398 aaKnown RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 RGS8P57771 180 aaPredicted RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 STX1BP61266 288 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 ARF6P62330 175 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 DYNC1I2Q13409 638 aaKnown RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 MAPK11Q15759 364 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 SGCAQ16586 387 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 HIST3H3Q16695 136 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CDONQ4KMG0 1287 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 DNAL1Q4LDG9 190 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 DMRTC1Q5HYR2 192 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 C10orf128Q5T292 105 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CASC10Q5T4H9 136 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 INTS11Q5TA45 600 aaKnown RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 METAP1DQ6UB28 335 aaPredicted RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 LYPD2Q6UXB3 125 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 LIAT1Q6ZQX7 453 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 HIST3H2AQ7L7L0 130 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 RNF144BQ7Z419 303 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 RANBP3LQ86VV4 465 aaPredicted RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 CALHM3Q86XJ0 350 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CMTM4Q8IZR5 234 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 OR5AS1Q8N127 324 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 WFDC9Q8NEX5 89 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 OR13G1Q8NGZ3 307 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 BBS10Q8TAM1 723 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 MUC7Q8TAX7 377 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 SLC38A5Q8WUX1 472 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 HIST1H2ACQ93077 130 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 ERGIC1Q969X5 290 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CMBLQ96DG6 245 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 SPATA5L1Q9BVQ7 753 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 OR2H1Q9GZK4 316 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 PCDHAC1Q9H158 963 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 WNT5BQ9H1J7 359 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 SEMA6AQ9H2E6 1030 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 SMURF2Q9HAU4 748 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 NANSQ9NR45 359 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 SDR39U1Q9NRG7 319 aaPredicted RBP4.84□□□□□ -1.63
SMG6-219ENST00000575663 PNPOQ9NVS9 261 aa4.84□□□□□ -1.63
SMG6-219ENST00000575663 CTSZQ9UBR2 303 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms