RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PRR23D2P0DMB1 279 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-216ENST00000575599 COX5BP10606 129 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 ZNF250P15622 560 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 PDLIM4P50479 330 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 PPP1CBP62140 327 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 CRMP1Q14194 572 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 CCDC92Q53HC0 331 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-216ENST00000575599 ENTHD1Q8IYW4 607 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 ZNF786Q8N393 782 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 OR51L1Q8NGJ5 315 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 OR2T4Q8NH00 348 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 OR1F12Q8NHA8 337 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 SLC25A40Q8TBP6 338 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 TMEM163Q8TC26 289 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 C10orf105Q8TEF2 133 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 NEU4Q8WWR8 484 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-216ENST00000575599 C4orf45Q96LM5 186 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 CDADC1Q9BWV3 514 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 OR2J1Q9GZK6 312 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 CMC2Q9NRP2 79 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 GRIP1Q9Y3R0 1128 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 RTTNQ86VV8 2226 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 TVP23AA6NH52 213 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 E9PQ18 207 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 M0R129 80 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 GYPBP06028 91 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 DAOP14920 347 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 ZNF823P16415 610 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 GCH1P30793 250 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 MPV17P39210 176 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 ISL1P61371 349 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 SNRPGP62308 76 aaKnown RBP11.35□□□□□ -0.59
RPAIN-216ENST00000575599 ZNF718Q3SXZ3 478 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 ZNF362Q5T0B9 420 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-216ENST00000575599 MEDAGQ5VYS4 303 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 TMEM154Q6P9G4 183 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 ARL9Q6T311 187 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 LYPD4Q6UWN0 246 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 CXXC5Q7LFL8 322 aaKnown RBP11.35□□□□□ -0.59
RPAIN-216ENST00000575599 GJC3Q8NFK1 279 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 OR2AJ1Q8NGZ0 328 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 RHOXF1Q8NHV9 184 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 SNX33Q8WV41 574 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 IPCEF1Q8WWN9 437 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-216ENST00000575599 DDOQ99489 341 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 PIMREGQ9BSJ6 248 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 MS4A5Q9H3V2 200 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 ELOVL3Q9HB03 270 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 MYOZ1Q9NP98 299 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-216ENST00000575599 SCN3BQ9NY72 215 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 SLCO1C1Q9NYB5 712 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 GPR160Q9UJ42 338 aa11.35□□□□□ -0.59
RPAIN-216ENST00000575599 CR1P17927 2039 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 IGLV3-9A0A075B6K5 115 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 OR6C6A6NF89 314 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 PRKYO43930 277 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 HEXAP06865 529 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 DBHP09172 617 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 CLUP10909 449 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 SLC25A16P16260 332 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 RPS27P42677 84 aaKnown RBP11.34□□□□□ -0.59
RPAIN-216ENST00000575599 RPS7P62081 194 aaKnown RBP11.34□□□□□ -0.59
RPAIN-216ENST00000575599 CSNK2BP67870 215 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 CDK5R2Q13319 367 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 ELFN2Q5R3F8 820 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 SLC18B1Q6NT16 456 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 CFAP77Q6ZQR2 320 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 OR6K6Q8NGW6 343 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 CNIH3Q8TBE1 160 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 KLF14Q8TD94 323 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-216ENST00000575599 ZNRF4Q8WWF5 429 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 GTF3AQ92664 365 aaKnown RBP11.34□□□□□ -0.59
RPAIN-216ENST00000575599 RFKQ969G6 155 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 UBE2FQ969M7 185 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 MARS2Q96GW9 593 aaKnown RBP11.34□□□□□ -0.59
RPAIN-216ENST00000575599 HDHD2Q9H0R4 259 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 MRPL22Q9NWU5 206 aaKnown RBP11.34□□□□□ -0.59
RPAIN-216ENST00000575599 BLOC1S6Q9UL45 172 aa11.34□□□□□ -0.59
RPAIN-216ENST00000575599 LOC390937A0A1W2PQ73 354 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 FAM183AA6NL82 134 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 LYNX1G3V0Z9 82 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 ICMTO60725 284 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 FAM20BO75063 409 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 LYNX1P0DP58 116 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 SPI1P17947 270 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 FMO3P31513 532 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 CHN2P52757 468 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 HIST1H3AP68431 136 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 GGTLC2Q14390 218 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 KLHL12Q53G59 568 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 TMEM255AQ5JRV8 349 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 RBM48Q5RL73 367 aaKnown RBP11.33□□□□□ -0.6
RPAIN-216ENST00000575599 C6orf141Q5SZD1 244 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 HIST2H3PS2Q5TEC6 136 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 MBNL2Q5VZF2 373 aaKnown RBP11.33□□□□□ -0.6
RPAIN-216ENST00000575599 PLBD1Q6P4A8 553 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 HIST2H3AQ71DI3 136 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 CPOQ8IVL8 374 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms