RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TPRP12270 2363 aaKnown RBP25.03■■□□□ 1.6
CTDNEP1-210ENST00000574322 ZNF724A8MTY0 619 aa25.02■■□□□ 1.6
CTDNEP1-210ENST00000574322 MAS1P04201 325 aa25.02■■□□□ 1.6
CTDNEP1-210ENST00000574322 PYHIN1Q6K0P9 492 aa25.02■■□□□ 1.6
CTDNEP1-210ENST00000574322 OR13C3Q8NGS6 347 aa25.02■■□□□ 1.6
CTDNEP1-210ENST00000574322 LIN7BQ9HAP6 207 aa25.02■■□□□ 1.6
CTDNEP1-210ENST00000574322 BCO1Q9HAY6 547 aa25.02■■□□□ 1.6
CTDNEP1-210ENST00000574322 CKLFQ9UBR5 152 aa25.02■■□□□ 1.6
CTDNEP1-210ENST00000574322 A0A0G2JMP0 313 aa25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 A0A0X1KG70 313 aa25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 CST2P09228 141 aa25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 OR4M2Q8NGB6 313 aa25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 ZNF275Q9NSD4 429 aaPredicted RBP25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 PARPBPQ9NWS1 579 aa25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 CSAG2Q9Y5P2 127 aa25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 LIPGQ9Y5X9 500 aa25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 KCNMB2Q9Y691 235 aa25.01■■□□□ 1.59
CTDNEP1-210ENST00000574322 H3BSH0 61 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 P2RY10O00398 339 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 OTX1P32242 354 aaPredicted RBP25■■□□□ 1.59
CTDNEP1-210ENST00000574322 NRN1LQ496H8 165 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 CCDC92Q53HC0 331 aaPredicted RBP25■■□□□ 1.59
CTDNEP1-210ENST00000574322 LINGO2Q7L985 606 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 WACQ9BTA9 647 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 ABCG5Q9H222 651 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 NOSIPQ9Y314 301 aaKnown RBP25■■□□□ 1.59
CTDNEP1-210ENST00000574322 TRGV5A0A0B4J1U4 118 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 FUOMA2VDF0 154 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 MEGF11A6BM72 1044 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 UBL3O95164 117 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 PRSS45Q7RTY3 260 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 GPR35Q9HC97 309 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 OR5V1Q9UGF6 321 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 STEAP1Q9UHE8 339 aa25■■□□□ 1.59
CTDNEP1-210ENST00000574322 TRAV17A0A0B4J275 112 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 A0A1B0GTI1 187 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 OR6C65A6NJZ3 312 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 PFDN1O60925 122 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 CX3CR1P49238 355 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 BCAP31P51572 246 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 ZNF121P58317 390 aaPredicted RBP24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 RNPS1Q15287 305 aaKnown RBP24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 ELFN2Q5R3F8 820 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 FAM166AQ6J272 317 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 DNAAF1Q8NEP3 725 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 SNRNP27Q8WVK2 155 aaKnown RBP24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 FBXO17Q96EF6 278 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 DEFB127Q9H1M4 99 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 CAMK2AQ9UQM7 478 aa24.99■■□□□ 1.59
CTDNEP1-210ENST00000574322 MRPL33O75394 65 aaKnown RBP24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 IGHG3P01860 377 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 CCL1P22362 96 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 PRKXP51817 358 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 PPP1R14BQ96C90 147 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 SLC25A38Q96DW6 304 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 WDYHV1Q96HA8 205 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 SLCO5A1Q9H2Y9 848 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 LDAHQ9H6V9 325 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 SYT7O43581 403 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 MADCAM1Q13477 382 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 TRIQKQ629K1 86 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 CMTM4Q8IZR5 234 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 LRRC18Q8N456 261 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 OR8B12Q8NGG6 310 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 FNDC9Q8TBE3 224 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 RAB40AQ8WXH6 277 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 ALKBH3Q96Q83 286 aaPredicted RBP24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 ABHD1Q96SE0 405 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 FOXB1Q99853 325 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 TAS2R4Q9NYW5 299 aa24.98■■□□□ 1.59
CTDNEP1-210ENST00000574322 ZNF407Q9C0G0 2248 aa24.97■■□□□ 1.59
CTDNEP1-210ENST00000574322 SLC17A2O00624 439 aa24.97■■□□□ 1.59
CTDNEP1-210ENST00000574322 APOC1P02654 83 aa24.97■■□□□ 1.59
CTDNEP1-210ENST00000574322 PITPNAQ00169 270 aa24.97■■□□□ 1.59
CTDNEP1-210ENST00000574322 CEACAM16Q2WEN9 425 aa24.97■■□□□ 1.59
CTDNEP1-210ENST00000574322 CCBE1Q6UXH8 406 aaPredicted RBP24.97■■□□□ 1.59
CTDNEP1-210ENST00000574322 SPRR3Q9UBC9 169 aa24.97■■□□□ 1.59
CTDNEP1-210ENST00000574322 RPL36A-HNRNPH2H7BZ11 118 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 PLA2G10O15496 165 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 TPPPO94811 219 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 SPNP16150 400 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 RFX2P48378 723 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 RSPO1Q2MKA7 263 aaPredicted RBP24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 HACD4Q5VWC8 232 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 GLT8D1Q68CQ7 371 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 ZNF283Q8N7M2 679 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 SLC5A6Q9Y289 635 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 PTPRQQ9UMZ3 2332 aa24.96■■□□□ 1.59
CTDNEP1-210ENST00000574322 A0A1B0GVI7 797 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 CTDSPLO15194 276 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 DOK2O60496 412 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 IGLV3-1P01715 115 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 CLDN12P56749 244 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 ECH1Q13011 328 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 RAB35Q15286 201 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 TAB1Q15750 504 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 ZNF529Q6P280 563 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 SERPINA12Q8IW75 414 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 TUSC5Q8IXB3 177 aa24.95■■□□□ 1.59
CTDNEP1-210ENST00000574322 C19orf18Q8NEA5 215 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms