RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 CPED1A4D0V7 1026 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 METTL21EPA6NDL7 271 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 EIF1AXP47813 144 aaKnown RBP20.27■□□□□ 0.83
VPS53-211ENST00000571805 PHF19Q5T6S3 580 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 RAB12Q6IQ22 244 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 GLRX5Q86SX6 157 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 ZNF584Q8IVC4 421 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 OR10H5Q8NGA6 315 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 POC1BQ8TC44 478 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 NKD1Q969G9 470 aa20.27■□□□□ 0.83
VPS53-211ENST00000571805 TOX3O15405 576 aaPredicted RBP20.26■□□□□ 0.83
VPS53-211ENST00000571805 PTGDSP41222 190 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 MYBPHQ13203 477 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 CLVS2Q5SYC1 327 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 FJX1Q86VR8 437 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 TDHQ8IZJ6 230 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 STEAP2Q8NFT2 490 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 OR1M1Q8NGA1 313 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 CMBLQ96DG6 245 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 MFFQ9GZY8 342 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 PTGES2Q9H7Z7 377 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 KLRF1Q9NZS2 232 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 PISDQ9UG56 409 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 ZNF230Q9UIE0 474 aaPredicted RBP20.26■□□□□ 0.83
VPS53-211ENST00000571805 FBXO4Q9UKT5 387 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 A0A1B0GTI1 187 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 LOC105371267A0A1B0GV96 52 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 LAP3P28838 519 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 MPGP29372 298 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 DHRS2Q13268 280 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 GK2Q14410 553 aaPredicted RBP20.26■□□□□ 0.83
VPS53-211ENST00000571805 PLPPR5Q32ZL2 321 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 SCGB2B2Q4G0G5 96 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 ZNF660Q6AZW8 331 aaPredicted RBP20.26■□□□□ 0.83
VPS53-211ENST00000571805 ZNF529Q6P280 563 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 OR6K3Q8NGY3 331 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 MRGPRX4Q96LA9 322 aa20.26■□□□□ 0.83
VPS53-211ENST00000571805 SYT7O43581 403 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 GNALP38405 381 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 CLDN6P56747 220 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 KLHL24Q6TFL4 600 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 C17orf107Q6ZR85 190 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 DMRTA2Q96SC8 542 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 SLC2A8Q9NY64 477 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 PPP4R1LQ9P1A2 415 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 SPEF1Q9Y4P9 236 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 RALGAPA1Q6GYQ0 2036 aa20.25■□□□□ 0.83
VPS53-211ENST00000571805 ASCC3Q8N3C0 2202 aaKnown RBP20.25■□□□□ 0.83
VPS53-211ENST00000571805 POM121CA8CG34 1229 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 CD8AP01732 235 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 VSIG8P0DPA2 414 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 SRSF4Q08170 494 aaKnown RBP20.24■□□□□ 0.83
VPS53-211ENST00000571805 MEF2DQ14814 521 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 THEM4Q5T1C6 240 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 SLC22A24Q8N4F4 322 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 FAM46BQ96A09 425 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 MRGPRFQ96AM1 343 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 OR6C1Q96RD1 312 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 VSIG4Q9Y279 399 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 IGLV3-32A0A0A0MS00 114 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 DISC1C4P0D8 188 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 BPNT1O95861 308 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 MPZP25189 248 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 MSX1P28360 303 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 P2RY4P51582 365 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 ZNF41P51814 821 aaPredicted RBP20.24■□□□□ 0.83
VPS53-211ENST00000571805 NKPD1Q17RQ9 610 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 CDNFQ49AH0 187 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 CFAP77Q6ZQR2 320 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 TRAPPC6BQ86SZ2 158 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 CD163Q86VB7 1156 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 OR5M8Q8NGP6 311 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 UQCC2Q9BRT2 126 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 LHFPL6Q9Y693 200 aa20.24■□□□□ 0.83
VPS53-211ENST00000571805 CSN2P05814 226 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 EMP2P54851 167 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 ACY1Q03154 408 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 WDR45BQ5MNZ6 344 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 GVQW1Q8N7I0 195 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 B3GALT1Q9Y5Z6 326 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 OR5L2Q8NGL0 311 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 LINC00052Q96N35 136 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 TTYH1Q9H313 450 aaPredicted RBP20.23■□□□□ 0.83
VPS53-211ENST00000571805 FBXL2Q9UKC9 423 aa20.23■□□□□ 0.83
VPS53-211ENST00000571805 OPN1LWP04000 364 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 PGA4P0DJD7 388 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 PGA3P0DJD8 388 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 ZP3P21754 424 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 STARD6P59095 220 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 CXADRP78310 365 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 MFAP5Q13361 173 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 INPP5JQ15735 1006 aaPredicted RBP20.22■□□□□ 0.83
VPS53-211ENST00000571805 SLC22A6Q4U2R8 563 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 RNASE10Q5GAN6 216 aaKnown RBP20.22■□□□□ 0.83
VPS53-211ENST00000571805 SLC51BQ86UW2 128 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 SLC25A42Q86VD7 318 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 BEST3Q8N1M1 668 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 SPEM1Q8N4L4 309 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 CHST4Q8NCG5 386 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 OR10G3Q8NGC4 313 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms