RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 STARP49675 285 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 MEOX1P50221 254 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 MMP15P51511 669 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 PSMA6P60900 246 aaKnown RBP15.28■□□□□ 0.04
RPAIN-208ENST00000571043 ST3GAL2Q16842 350 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 PHYHD1Q5SRE7 291 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 RPUSD3Q6P087 351 aaKnown RBP15.28■□□□□ 0.04
RPAIN-208ENST00000571043 FCRLAQ7L513 359 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-208ENST00000571043 CMTM4Q8IZR5 234 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 CHAC2Q8WUX2 184 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 RAB40AQ8WXH6 277 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 ABHD1Q96SE0 405 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 THAP7Q9BT49 309 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-208ENST00000571043 NELFAQ9H3P2 528 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 ZNF71Q9NQZ8 489 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-208ENST00000571043 ASH2LQ9UBL3 628 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 OR5V1Q9UGF6 321 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 STEAP1Q9UHE8 339 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 FLVCR1Q9Y5Y0 555 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 SVILO95425 2214 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 MEGF11A6BM72 1044 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 TPPPO94811 219 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 GLSO94925 669 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-208ENST00000571043 CD37P11049 281 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 SELENOPP49908 381 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 ZNF84P51523 738 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 CLDN15P56746 228 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 PLEKHN1Q494U1 663 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-208ENST00000571043 UBQLNLQ8IYU4 475 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 CELF2-AS1Q8N7Q2 184 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 SLC39A7Q92504 469 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 TRIM63Q969Q1 353 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 SLC25A38Q96DW6 304 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 NEDD4LQ96PU5 975 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 TTTY12Q9BZ98 90 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 ULBP2Q9BZM5 246 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 PBOV1Q9GZY1 135 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 HDHD2Q9H0R4 259 aa15.27■□□□□ 0.04
RPAIN-208ENST00000571043 PNRC2Q9NPJ4 139 aaKnown RBP15.27■□□□□ 0.04
RPAIN-208ENST00000571043 RBFOX1Q9NWB1 397 aaKnown RBP15.27■□□□□ 0.04
RPAIN-208ENST00000571043 NUFIP1Q9UHK0 495 aaKnown RBP15.27■□□□□ 0.04
RPAIN-208ENST00000571043 A0A1B0GVC2 190 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 A6NIN4 97 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 LYRM1O43325 122 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 GSTZ1O43708 216 aaPredicted RBP15.27■□□□□ 0.03
RPAIN-208ENST00000571043 CYTIPO60759 359 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 TTRP02766 147 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 SFTPCP11686 197 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 CTSSP25774 331 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 HSD11B1P28845 292 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 GRB2P62993 217 aaKnown RBP15.27■□□□□ 0.03
RPAIN-208ENST00000571043 TAF13Q15543 124 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 SGCAQ16586 387 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 ASPHD2Q6ICH7 369 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 DNAAF1Q8NEP3 725 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 OR13C3Q8NGS6 347 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 NABP1Q96AH0 204 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 CLEC4AQ9UMR7 237 aa15.27■□□□□ 0.03
RPAIN-208ENST00000571043 H3BSH0 61 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ERVH48-1M5A8F1 160 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 RER1O15258 196 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ACSM4P0C7M7 580 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 MNDAP41218 407 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ART1P52961 327 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 CLDN12P56749 244 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 MRPS34P82930 218 aaKnown RBP15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ENDOGQ14249 297 aaKnown RBP15.26■□□□□ 0.03
RPAIN-208ENST00000571043 GLT8D1Q68CQ7 371 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ZNF57Q68EA5 555 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-208ENST00000571043 DRAXINQ8NBI3 349 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-208ENST00000571043 DUSP18Q8NEJ0 188 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 GJC3Q8NFK1 279 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ENKURQ8TC29 256 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ROBO4Q8WZ75 1007 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 HAVCR1Q96D42 359 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 S100A16Q96FQ6 103 aaKnown RBP15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ZNF416Q9BWM5 594 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 DDX28Q9NUL7 540 aaKnown RBP15.26■□□□□ 0.03
RPAIN-208ENST00000571043 NPAP1Q9NZP6 1156 aa15.26■□□□□ 0.03
RPAIN-208ENST00000571043 ALPK2Q86TB3 2170 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 P2RY10O00398 339 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 SLC17A2O00624 439 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 EEF1E1O43324 174 aaKnown RBP15.25■□□□□ 0.03
RPAIN-208ENST00000571043 SULT1B1O43704 296 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 RFC3P40938 356 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 LHX2P50458 406 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 HIST1H3AP68431 136 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 PLGLB1Q02325 96 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 GTF3C1Q12789 2109 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 BCL2A1Q16548 175 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 HIST2H3PS2Q5TEC6 136 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 FAM166AQ6J272 317 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 HIST2H3AQ71DI3 136 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 AAED1Q7RTV5 226 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 TMEM251Q8N6I4 163 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 DTX3Q8N9I9 347 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 SYNPRQ8TBG9 265 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 C15orf40Q8WUR7 153 aa15.25■□□□□ 0.03
RPAIN-208ENST00000571043 TMEM45BQ96B21 275 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms