RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HIST1H3AP68431 136 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 HLXQ14774 488 aaPredicted RBP10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 SLC36A3Q495N2 470 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 SPRNQ5BIV9 151 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 CLEC12AQ5QGZ9 265 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 HIST2H3PS2Q5TEC6 136 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 DCAF12L2Q5VW00 463 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 RPL13AP3Q6NVV1 102 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 PGBD2Q6P3X8 592 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 CORO6Q6QEF8 472 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 CYP2R1Q6VVX0 501 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 Q6ZR03 302 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 HIST2H3AQ71DI3 136 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR5AS1Q8N127 324 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 LINC00471Q8N535 108 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 SPICQ8N5J4 248 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR2AJ1Q8NGZ0 328 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 ST7LQ8TDW4 575 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 PTP4A1Q93096 173 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 CDADC1Q9BWV3 514 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 FN3KQ9H479 309 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 G6PC2Q9NQR9 355 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 ACTR3BQ9P1U1 418 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 IL19Q9UHD0 177 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 PCDHB10Q9UN67 800 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 PPP1R3CQ9UQK1 317 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 NPTNQ9Y639 398 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 CDH10Q9Y6N8 788 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 LOC105371242A0A075B767 164 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 TNFRSF11BO00300 401 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 IGHV2-70P01814 119 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 ECH1Q13011 328 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 SLC35F1Q5T1Q4 408 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR2T2Q6IF00 324 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 FBXW12Q6X9E4 464 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 CFAP77Q6ZQR2 320 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZBTB46Q86UZ6 589 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 LINC00346Q8IVM7 164 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 KLHL36Q8N4N3 616 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 ATG16L2Q8NAA4 619 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR10AD1Q8NGE0 317 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR9Q2Q8NGE9 314 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR52E2Q8NGJ4 325 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZNF418Q8TF45 676 aaPredicted RBP10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 ITLN1Q8WWA0 313 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZNF582Q96NG8 517 aaPredicted RBP10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR2V2Q96R30 315 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 CITED4Q96RK1 184 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 PITX2Q99697 317 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 ATF6BQ99941 703 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 EGLN3Q9H6Z9 239 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 DCAF16Q9NXF7 216 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 LYVE1Q9Y5Y7 322 aa10.44□□□□□ -0.74
CTDNEP1-205ENST00000570828 A0A0A6YYJ9 748 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR6C68A6NDL8 312 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 B2RBV5 119 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 FOXH1O75593 365 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 CCNB2O95067 398 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 SBK2P0C263 348 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 SELEP16581 610 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 EPHA1P21709 976 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 MAGEA2P43356 314 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 BTG1P62324 171 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 LCN2P80188 198 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 DBPQ10586 325 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 HNRNPA0Q13151 305 aaKnown RBP10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 SLC18B1Q6NT16 456 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 SLC27A4Q6P1M0 643 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 C1QL2Q7Z5L3 287 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 ARHGAP24Q8N264 748 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 FITM2Q8N6M3 262 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZNF283Q8N7M2 679 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 BHLHE23Q8NDY6 225 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 PROKR2Q8NFJ6 384 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR8G5Q8NG78 346 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR13G1Q8NGZ3 307 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 BTBD10Q9BSF8 475 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 HCAR1Q9BXC0 346 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 TMPRSS13Q9BYE2 586 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 TRIM15Q9C019 465 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 MUC13Q9H3R2 512 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 WDR76Q9H967 626 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 TBC1D23Q9NUY8 699 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 KCNG2Q9UJ96 466 aa10.43□□□□□ -0.74
CTDNEP1-205ENST00000570828 F5H5K5 113 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 IFNL4K9M1U5 179 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 RGS9O75916 674 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZNF823P16415 610 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 GGT2P36268 569 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 SRP9P49458 86 aaKnown RBP10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 HMGA2P52926 109 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 POU4F2Q12837 409 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 TRAP1Q12931 704 aaKnown RBP10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 MALLQ13021 153 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZMYND11Q15326 602 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 TMEM155Q4W5P6 130 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 DHFR2Q86XF0 187 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 MUC20Q8N307 709 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 CYB561A3Q8NBI2 242 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms