RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 HLA-DOBP13765 273 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 GABRA1P14867 456 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 CPN1P15169 458 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ARSBP15848 533 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ZNF708P17019 499 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 C4BPBP20851 252 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 FMODQ06828 376 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 TCF15Q12870 199 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ZBTB37Q5TC79 503 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 STEAP3Q658P3 488 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ZNF813Q6ZN06 617 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 OR2W3Q7Z3T1 314 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 FGD2Q7Z6J4 655 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 LINC00346Q8IVM7 164 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 C1orf174Q8IYL3 243 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 PRSS33Q8NF86 280 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 STEAP2Q8NFT2 490 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 CREB3L1Q96BA8 519 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 POM121Q96HA1 1249 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ZFP3Q96NJ6 502 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 SCGB3A2Q96PL1 93 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 BARHL1Q9BZE3 327 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 DDX28Q9NUL7 540 aaKnown RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 RBFOX1Q9NWB1 397 aaKnown RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 ZNF107Q9UII5 783 aaPredicted RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 M0R135 149 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ADAM10O14672 748 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 SMAD9O15198 467 aaKnown RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 LYRM1O43325 122 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 GSTZ1O43708 216 aaPredicted RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 DOK2O60496 412 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ZNF780AO75290 641 aaPredicted RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 OPN1LWP04000 364 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 CFPP27918 469 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 APLNRP35414 380 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 CBX5P45973 191 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 PRKXP51817 358 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 UBE2NP61088 152 aaKnown RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 SRYQ05066 204 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 AKAP14Q86UN6 197 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 KCNG3Q8TAE7 436 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 SYNPRQ8TBG9 265 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 LGALS14Q8TCE9 139 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ST7LQ8TDW4 575 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 ZNF799Q96GE5 643 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 GMPPAQ96IJ6 420 aaPredicted RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 USB1Q9BQ65 265 aaKnown RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 THAP7Q9BT49 309 aaPredicted RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 TMEM38BQ9NVV0 291 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 EIF3KQ9UBQ5 218 aaKnown RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 SLC5A6Q9Y289 635 aa5.34□□□□□ -1.55
CYLD-216ENST00000569891 SIRT4Q9Y6E7 314 aaPredicted RBP5.34□□□□□ -1.55
CYLD-216ENST00000569891 EFNA2O43921 213 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 KDM4BO94953 1096 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 ALDOBP05062 364 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 ADRA2AP08913 450 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 TUBG1P23258 451 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 TGFBR1P36897 503 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 HTR5AP47898 357 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 GFRA1P56159 465 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 CCBE1Q6UXH8 406 aaPredicted RBP5.34□□□□□ -1.56
CYLD-216ENST00000569891 C3P1Q6ZMU1 363 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 KRT74Q7RTS7 529 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 OR1M1Q8NGA1 313 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 OR1F12Q8NHA8 337 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 DACT3Q96B18 629 aaPredicted RBP5.34□□□□□ -1.56
CYLD-216ENST00000569891 SPSB1Q96BD6 273 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 HAVCR1Q96D42 359 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 LIN7BQ9HAP6 207 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 PROK2Q9HC23 129 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 EMC7Q9NPA0 242 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 ASCL3Q9NQ33 180 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 TUBG2Q9NRH3 451 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 PCDHGA9Q9Y5G4 932 aaKnown RBP5.34□□□□□ -1.56
CYLD-216ENST00000569891 NUBP2Q9Y5Y2 271 aa5.34□□□□□ -1.56
CYLD-216ENST00000569891 LOC390937A0A1W2PQ73 354 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 TPD52L2O43399 206 aaKnown RBP5.33□□□□□ -1.56
CYLD-216ENST00000569891 ALX3O95076 343 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 B3GALT5-AS1P59052 145 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 RBPJQ06330 500 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 MZT1Q08AG7 82 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 DEFB109BQ30KR1 87 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 HES5Q5TA89 166 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 TMEM123Q8N131 208 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 CSNK2A3Q8NEV1 391 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 CCDC107Q8WV48 283 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 FAM3DQ96BQ1 224 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 NUDT16L1Q9BRJ7 211 aaKnown RBP5.33□□□□□ -1.56
CYLD-216ENST00000569891 BCO1Q9HAY6 547 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 ING3Q9NXR8 418 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 MRPS18BQ9Y676 258 aaKnown RBP5.33□□□□□ -1.56
CYLD-216ENST00000569891 FER1L5A0AVI2 2057 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 A0A1W2PQ09 198 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 HLA-DQB1P01920 261 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 CRHP06850 196 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 ELK1P19419 428 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 IL11P20809 199 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 PRSS3P35030 304 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 MAGEA5P43359 124 aa5.33□□□□□ -1.56
CYLD-216ENST00000569891 TNFSF10P50591 281 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms