RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ZNF775Q96BV0 537 aaPredicted RBP7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ELMOD3Q96FG2 381 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 PRRX2Q99811 253 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 CHRNA10Q9GZZ6 450 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 SMOC1Q9H4F8 434 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 EXO5Q9H790 373 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 VSX1Q9NZR4 365 aaPredicted RBP7.82□□□□□ -1.16
LINC00558-201ENST00000569422 SCP2D1Q9UJQ7 156 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 SIT1Q9Y3P8 196 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ETV7Q9Y603 341 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ZDBF2Q9HCK1 2354 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 LOC100289279A0A1B0GTE1 492 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 CIB4A0PJX0 185 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 TMEM235A6NFC5 223 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 FTCDNL1E5RQL4 147 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 VSIG10L2P0DP72 767 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF28P17035 718 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 OR3A3P47888 321 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 MYBPHQ13203 477 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 MFAP5Q13361 173 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 ANKRD16Q6P6B7 361 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 WDR74Q6RFH5 385 aaPredicted RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 GLDNQ6ZMI3 551 aaPredicted RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 C17orf107Q6ZR85 190 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 OR4S1Q8NGB4 309 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 C11orf40Q8WZ69 217 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 DDIT4LQ96D03 193 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 HHLA2Q9UM44 414 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 SRPK3Q9UPE1 567 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 FXYD6-FXYD2A0A087WZ82 144 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 IGHV5-10-1A0A0J9YXX1 117 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 NAP1L6A6NFF2 107 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 ANKUB1A6NFN9 424 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 OR6C76A6NM76 312 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 H7C417 338 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 SLC17A2O00624 439 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 GOSR2O14653 212 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 RAMP1O60894 148 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 RGS11O94810 467 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 MPC2O95563 127 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 EXOSC2Q13868 293 aaKnown RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 LYSMD4Q5XG99 296 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 FAM198BQ6UWH4 519 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 CDH24Q86UP0 819 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 CATSPERDQ86XM0 798 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 SLC26A10Q8NG04 563 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 OR13C9Q8NGT0 318 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 ASB10Q8WXI3 467 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 DNASE2BQ8WZ79 361 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 SOX7Q9BT81 388 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 DEFB126Q9BYW3 111 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 BCL2L14Q9BZR8 327 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 TINAGL1Q9GZM7 467 aaPredicted RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 FXYD6Q9H0Q3 95 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 PTGES2Q9H7Z7 377 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 PLEKHA1Q9HB21 404 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 PRDM6Q9NQX0 595 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 KLHL13Q9P2N7 655 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 MTFP1Q9UDX5 166 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 FER1L5A0AVI2 2057 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 TMEM200CA6NKL6 621 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 PATE3B3GLJ2 98 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 ARPC5O15511 151 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 SLC22A5O76082 557 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 NDUFB6O95139 128 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 FAUP35544 74 aaKnown RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 STARP49675 285 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 CLRN1P58418 232 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 TAF13Q15543 124 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 RSPO4Q2I0M5 234 aaPredicted RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 TMEM176BQ3YBM2 270 aaPredicted RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 TEX30Q5JUR7 227 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 SLC25A24Q6NUK1 477 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 PRSS42Q7Z5A4 293 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 CPEB2Q7Z5Q1 589 aaKnown RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 PPP1R3BQ86XI6 285 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 NFAM1Q8NET5 270 aaPredicted RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 OR4D6Q8NGJ1 314 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 STK35Q8TDR2 534 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 RBP7Q96R05 134 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 GPN1Q9HCN4 374 aaPredicted RBP7.81□□□□□ -1.16
LINC00558-201ENST00000569422 CHST11Q9NPF2 352 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 IL19Q9UHD0 177 aa7.81□□□□□ -1.16
LINC00558-201ENST00000569422 KIF26BQ2KJY2 2108 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 IGHV3-15A0A0B4J1V0 119 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 UBE2QL1A1L167 161 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF814B7Z6K7 855 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 K7ESF4 209 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 M0R233 179 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 AMY2AP04746 511 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 STARD6P59095 220 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 LPAL2Q16609 132 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 SLC22A6Q4U2R8 563 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 SAPCD1Q5SSQ6 148 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 STEAP1BQ6NZ63 245 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 KLHL24Q6TFL4 600 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 RNF144BQ7Z419 303 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 RTN4RL2Q86UN3 420 aa7.8□□□□□ -1.16
LINC00558-201ENST00000569422 SLAMF6Q96DU3 332 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms