RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 DGCR6LQ9BY27 220 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 TMPRSS13Q9BYE2 586 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 NMNAT2Q9BZQ4 307 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 EGLN1Q9GZT9 426 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 C1orf21Q9H246 121 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 SRA1Q9HD15 236 aaKnown RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 TMEM106BQ9NUM4 274 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 TAS2R1Q9NYW7 299 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 PTTG3PQ9NZH4 202 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 COMMD3-BMI1R4GMX3 469 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 ARHGAP32A7KAX9 2087 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 WNK2Q9Y3S1 2297 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 C5orf63A6NC05 138 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 IQCF6A8MYZ5 107 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 F5H0A9 414 aaPredicted RBP6.59□□□□□ -1.35
CDH3-209ENST00000569080 PLPP2O43688 288 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 CCNB2O95067 398 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 SOX14O95416 240 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 PNPP00491 289 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 FSHBP01225 129 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 PCMT1P22061 227 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 CENPAP49450 140 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 SLC25A1P53007 311 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 PRSS12P56730 875 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 SLC3A1Q07837 685 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 TRAP1Q12931 704 aaKnown RBP6.59□□□□□ -1.35
CDH3-209ENST00000569080 CRMP1Q14194 572 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 ZMYND11Q15326 602 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 MICAQ29983 383 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 LINC01590Q5TEZ4 76 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 OR2T2Q6IF00 324 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 ACSM5Q6NUN0 579 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 CD300LDQ6UXZ3 194 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 DHFR2Q86XF0 187 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 OR5AS1Q8N127 324 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 LINC00471Q8N535 108 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 RFLNBQ8N5W9 214 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 OR2Z1Q8NG97 314 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 OR52L1Q8NGH7 329 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 OR9Q1Q8NGQ5 310 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 RAB1CQ92928 201 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 PTP4A1Q93096 173 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 TIMD4Q96H15 378 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 MEGF10Q96KG7 1140 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 OR2V2Q96R30 315 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 GAL3ST1Q99999 423 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 NIPSNAP1Q9BPW8 284 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 SLC30A2Q9BRI3 323 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 C19orf24Q9BVV8 132 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 WDR76Q9H967 626 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 GCM1Q9NP62 436 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 ARMC1Q9NVT9 282 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 IL19Q9UHD0 177 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 KCNG2Q9UJ96 466 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 SAMHD1Q9Y3Z3 626 aaKnown RBP6.59□□□□□ -1.35
CDH3-209ENST00000569080 NPTNQ9Y639 398 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 U3KQV3 271 aa6.59□□□□□ -1.35
CDH3-209ENST00000569080 LOC105371242A0A075B767 164 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 ARRDC5A6NEK1 342 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 TVP23AA6NH52 213 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 A8MXK9 166 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 H0YL77 283 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 GYPBP06028 91 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 RAP2AP10114 183 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 CLUP10909 449 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 SELEP16581 610 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 SPI1P17947 270 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 ZFP36P26651 326 aaKnown RBP6.58□□□□□ -1.36
CDH3-209ENST00000569080 SEC61A1P61619 476 aaKnown RBP6.58□□□□□ -1.36
CDH3-209ENST00000569080 BTG1P62324 171 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 ECH1Q13011 328 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 GK2Q14410 553 aaPredicted RBP6.58□□□□□ -1.36
CDH3-209ENST00000569080 TUSC1Q2TAM9 212 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 SNAI3Q3KNW1 292 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 SLC36A3Q495N2 470 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 TMEM155Q4W5P6 130 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 FAM98BQ52LJ0 330 aaKnown RBP6.58□□□□□ -1.36
CDH3-209ENST00000569080 ZNF771Q7L3S4 317 aaPredicted RBP6.58□□□□□ -1.36
CDH3-209ENST00000569080 C1QL2Q7Z5L3 287 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 TMEM179BQ7Z7N9 219 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 NAA40Q86UY6 237 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 BHLHE23Q8NDY6 225 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 PROKR2Q8NFJ6 384 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 OR2T33Q8NG76 320 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 OR8G5Q8NG78 346 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 OR10G2Q8NGC3 310 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 OR51L1Q8NGJ5 315 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 OR2T4Q8NH00 348 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 ST7LQ8TDW4 575 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 CANT1Q8WVQ1 401 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 SLC7A6OSQ96CW6 309 aaPredicted RBP6.58□□□□□ -1.36
CDH3-209ENST00000569080 PITX2Q99697 317 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 CHID1Q9BWS9 393 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 TSSK6Q9BXA6 273 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 HCAR1Q9BXC0 346 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 METTL17Q9H7H0 456 aaPredicted RBP6.58□□□□□ -1.36
CDH3-209ENST00000569080 REEP1Q9H902 201 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 TBC1D23Q9NUY8 699 aa6.58□□□□□ -1.36
CDH3-209ENST00000569080 OPN4Q9UHM6 478 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms