RNA–Protein interactions for RNA: ENST00000568390.5

NUTF2-204, Transcript of nuclear transport factor 2, human

TSL 3

Gene NUTF2, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUTF2-204	ENST00000568390	FMO3	P31513	532 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	CDH15	P55291	814 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	CBX1	P83916	185 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	TNFAIP6	P98066	277 aa	Predicted RBP	13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	BNIP1	Q12981	228 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	CDK5R2	Q13319	367 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	HLX	Q14774	488 aa	Predicted RBP	13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	TMEM179B	Q7Z7N9	219 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	OR2Z1	Q8NG97	314 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	ZNRF4	Q8WWF5	429 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	CCL17	Q92583	94 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	TIMD4	Q96H15	378 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	CADM1	Q9BY67	442 aa	Known RBP	13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	ZNF556	Q9HAH1	456 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	MXRA5	Q9NR99	2828 aa		13.42	□□□□□ -0.26
NUTF2-204	ENST00000568390	CD55	P08174	381 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	ACSM4	P0C7M7	580 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	FAM157C	P0CG43	387 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	SPI1	P17947	270 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	HNF1A	P20823	631 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	POU1F1	P28069	291 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	RPS27	P42677	84 aa	Known RBP	13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	RASSF2	P50749	326 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	SLC25A1	P53007	311 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	SLC3A1	Q07837	685 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	FAM120AOS	Q5T036	256 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	LYPD4	Q6UWN0	246 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	FBXW12	Q6X9E4	464 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	OR5AS1	Q8N127	324 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	IQCF1	Q8N6M8	205 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	OR6K6	Q8NGW6	343 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	RAB1C	Q92928	201 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	C1orf159	Q96HA4	380 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	MAP6	Q96JE9	813 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	NMNAT2	Q9BZQ4	307 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	PNRC2	Q9NPJ4	139 aa	Known RBP	13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	CMC2	Q9NRP2	79 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	DNAJB9	Q9UBS3	223 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390	COMMD3-BMI1	R4GMX3	469 aa		13.41	□□□□□ -0.26
NUTF2-204	ENST00000568390		B4DSR2	109 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	LCAT	P04180	440 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	SPARC	P09486	303 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	CLU	P10909	449 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	GRK5	P34947	590 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	ENTPD1	P49961	510 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	TPTE	P56180	551 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	CR1L	Q2VPA4	569 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	KRTAP27-1	Q3LI81	207 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	OR2T2	Q6IF00	324 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390		Q6ZR03	302 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	IL17REL	Q6ZVW7	336 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	HS3ST5	Q8IZT8	346 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	ZNF511	Q8NB15	262 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	SPTSSA	Q969W0	71 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	OTULIN	Q96BN8	352 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	HCAR1	Q9BXC0	346 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	C1QTNF5	Q9BXJ0	243 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	WDR76	Q9H967	626 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	WIPI2	Q9Y4P8	454 aa		13.4	□□□□□ -0.26
NUTF2-204	ENST00000568390	ARHGAP32	A7KAX9	2087 aa		13.4	□□□□□ -0.27
NUTF2-204	ENST00000568390		M0R135	149 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	ZNF593	O00488	134 aa	Predicted RBP	13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	SURF4	O15260	269 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	ATP5H	O75947	161 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	ANXA8	P13928	327 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	SRD5A1	P18405	259 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	TNFRSF1A	P19438	455 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	PAICS	P22234	425 aa	Known RBP	13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	PRKACG	P22612	351 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	SLC6A9	P48067	706 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	BLVRA	P53004	296 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	DVL1P1	P54792	670 aa	Predicted RBP	13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	LMO4	P61968	165 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	MALL	Q13021	153 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	SPRN	Q5BIV9	151 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	SLC27A4	Q6P1M0	643 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	COLCA1	Q6ZS62	124 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	DCXR	Q7Z4W1	244 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	PEG10	Q86TG7	708 aa	Known RBP	13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	GLCCI1	Q86VQ1	547 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	ATG16L2	Q8NAA4	619 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	PAPD5	Q8NDF8	572 aa	Known RBP	13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	OR10S1	Q8NGN2	331 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	SLCO4A1	Q96BD0	722 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	ZNF799	Q96GE5	643 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	ZNF582	Q96NG8	517 aa	Predicted RBP	13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	MED20	Q9H944	212 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	LPAR2	Q9HBW0	351 aa		13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.39	□□□□□ -0.27
NUTF2-204	ENST00000568390	ISPD	A4D126	451 aa		13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	FAM183A	A6NL82	134 aa		13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	FAM157A	C9JC47	383 aa		13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	DEAF1	O75398	565 aa	Predicted RBP	13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	TIPRL	O75663	272 aa		13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	PSKH1	P11801	424 aa		13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	OSM	P13725	252 aa		13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	PCMT1	P22061	227 aa		13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	GINS1	Q14691	196 aa		13.38	□□□□□ -0.27
NUTF2-204	ENST00000568390	TAF13	Q15543	124 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms