RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 CNTNAP3BQ96NU0 1288 aa9.15□□□□□ -0.94
TCF4-236ENST00000567880 PDCD1LG2Q9BQ51 273 aa9.15□□□□□ -0.94
TCF4-236ENST00000567880 CNTNAP3Q9BZ76 1288 aa9.15□□□□□ -0.94
TCF4-236ENST00000567880 KCNN2Q9H2S1 579 aa9.15□□□□□ -0.94
TCF4-236ENST00000567880 RNF167Q9H6Y7 350 aa9.15□□□□□ -0.94
TCF4-236ENST00000567880 PLEK2Q9NYT0 353 aa9.15□□□□□ -0.94
TCF4-236ENST00000567880 STUB1Q9UNE7 303 aa9.15□□□□□ -0.94
TCF4-236ENST00000567880 DIDO1Q9BTC0 2240 aaKnown RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 A0A1W2PPW3 197 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 PLPP2O43688 288 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 GPX5O75715 221 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 ITGA5P08648 1049 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 HOXD4P09016 255 aaPredicted RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 CST2P09228 141 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 ZNF32P17041 273 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 MPGP29372 298 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 TIMP3P35625 211 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 OPRL1P41146 370 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 GALK2Q01415 458 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 MFGE8Q08431 387 aaPredicted RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 PMPCAQ10713 525 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 INSL4Q14641 139 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 ZNF846Q147U1 533 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 ST3GAL2Q16842 350 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 CCDC58Q4VC31 144 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 DMKNQ6E0U4 476 aaPredicted RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 GHSRQ92847 366 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 TRMT61AQ96FX7 289 aaKnown RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 HDHD5Q9BXW7 423 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 OPN3Q9H1Y3 402 aaPredicted RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 PNRC2Q9NPJ4 139 aaKnown RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 SSR3Q9UNL2 185 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 PROCRQ9UNN8 238 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 ZNF835Q9Y2P0 537 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 SF3B6Q9Y3B4 125 aaKnown RBP9.15□□□□□ -0.95
TCF4-236ENST00000567880 N6AMT1Q9Y5N5 214 aa9.15□□□□□ -0.95
TCF4-236ENST00000567880 ESPL1Q14674 2120 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 H3BSH0 61 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 OGG1O15527 345 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 DOK2O60496 412 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 ZNF254O75437 659 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 RAD51DO75771 328 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 LYZL6O75951 148 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 IL18BPO95998 194 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 PNPP00491 289 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 GLI4P10075 376 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 CD8BP10966 210 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 CRYBB2P43320 205 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 TGM4P49221 684 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 PRKXP51817 358 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 FABP5Q01469 135 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 GPR50Q13585 617 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 ALKBH1Q13686 389 aaKnown RBP9.14□□□□□ -0.95
TCF4-236ENST00000567880 SPCS2Q15005 226 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 WDR38Q5JTN6 314 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 DEGS2Q6QHC5 323 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 OR2C3Q8N628 320 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 OR13C5Q8NGS8 318 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 OR2G2Q8NGZ5 317 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 FGFBP3Q8TAT2 258 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 NDNFQ8TB73 568 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 STARD4Q96DR4 205 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 PGLYRP3Q96LB9 341 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 DCLRE1CQ96SD1 692 aaKnown RBP9.14□□□□□ -0.95
TCF4-236ENST00000567880 ATF6BQ99941 703 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 HEATR1Q9H583 2144 aaKnown RBP9.14□□□□□ -0.95
TCF4-236ENST00000567880 RNF121Q9H920 327 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 FRRS1LQ9P0K9 344 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 KALRNO60229 2985 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 IGSF10Q6WRI0 2623 aa9.14□□□□□ -0.95
TCF4-236ENST00000567880 TRGV8A0A0C4DH27 118 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 TMEM269A0A1B0GVZ9 245 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 CIB4A0PJX0 185 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 HSPB2A8KAH6 182 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 SGCEO43556 437 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 ZFPL1O95159 310 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 HLA-HP01893 362 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 HLA-DPB1P04440 258 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 CD79AP11912 226 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 IGHV1-2P23083 117 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 TUBA1BP68363 451 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 SCRN3Q0VDG4 424 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 MRPL28Q13084 256 aaKnown RBP9.13□□□□□ -0.95
TCF4-236ENST00000567880 TSC22D1Q15714 1073 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 STK11Q15831 433 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 HSPB2Q16082 182 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 EIF2S3LQ2VIR3 472 aaKnown RBP9.13□□□□□ -0.95
TCF4-236ENST00000567880 NRN1LQ496H8 165 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 HIKESHIQ53FT3 197 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 ELFN2Q5R3F8 820 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 C22orf42Q6IC83 251 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 ZNF774Q6NX45 483 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 Q6ZT83 130 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 TUBA1AQ71U36 451 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 PRSS35Q8N3Z0 413 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 ZNF610Q8N9Z0 462 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 OR1K1Q8NGR3 316 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 OR5AK2Q8NH90 309 aa9.13□□□□□ -0.95
TCF4-236ENST00000567880 AKR7LQ8NHP1 331 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms