RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ECH1Q13011 328 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 TRIM25Q14258 630 aaKnown RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 MEP1BQ16820 701 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 KRTAP27-1Q3LI81 207 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 KRTAP24-1Q3LI83 254 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 SLC36A3Q495N2 470 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 FAM98BQ52LJ0 330 aaKnown RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 CLEC12AQ5QGZ9 265 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 LIPNQ5VXI9 398 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OTPQ5XKR4 325 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 SLC18B1Q6NT16 456 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 SLC27A4Q6P1M0 643 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 CORO6Q6QEF8 472 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 FBXW12Q6X9E4 464 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 CFAP77Q6ZQR2 320 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 DHFR2Q86XF0 187 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 ZNF283Q8N7M2 679 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 CCDC197Q8NCU1 140 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 SDR9C7Q8NEX9 313 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 SLC26A10Q8NG04 563 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OR2Z1Q8NG97 314 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OR4M2Q8NGB6 313 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OR9Q2Q8NGE9 314 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OR52E2Q8NGJ4 325 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OR2AJ1Q8NGZ0 328 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OR13G1Q8NGZ3 307 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OR4K13Q8NH42 304 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 APOBEC3DQ96AK3 386 aaPredicted RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 CMBLQ96DG6 245 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 NSL1Q96IY1 281 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 PITX2Q99697 317 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 ATF6BQ99941 703 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 GAL3ST1Q99999 423 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 BTBD10Q9BSF8 475 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 CDADC1Q9BWV3 514 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 C1orf21Q9H246 121 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 EGLN3Q9H6Z9 239 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 LPAR2Q9HBW0 351 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 SRA1Q9HD15 236 aaKnown RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 RPRD1BQ9NQG5 326 aaKnown RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 G6PC2Q9NQR9 355 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 IL20Q9NYY1 176 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 CYB5R1Q9UHQ9 305 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 KCNG2Q9UJ96 466 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 PRPF19Q9UMS4 504 aaKnown RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 BAIAP2Q9UQB8 552 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 PPP1R3CQ9UQK1 317 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 NPTNQ9Y639 398 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 CDH10Q9Y6N8 788 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 DOCK11Q5JSL3 2073 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 PPIAL4EA0A075B759 164 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 A0A0A6YYJ9 748 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 PPIAL4CA0A0B4J2A2 164 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 A0A1B0GWJ7 208 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 IQCF6A8MYZ5 107 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 PPIAL4DF5H284 164 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 F5H5K5 113 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 J3QLI3 93 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 IFNL4K9M1U5 179 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 DYNC1I1O14576 645 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 PLPP2O43688 288 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 FOXH1O75593 365 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 CCNB2O95067 398 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 GASTP01350 101 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 IGHV2-70P01814 119 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ACSM4P0C7M7 580 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 PPIAL4FP0DN26 164 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 T-ENOLP0DO92 83 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 RAP2AP10114 183 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ZNF823P16415 610 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 SELEP16581 610 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 HOXB6P17509 224 aaKnown RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 GGT2P36268 569 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ERFP50548 548 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 TPTEP56180 551 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 BTG1P62324 171 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 TRAP1Q12931 704 aaKnown RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 MALLQ13021 153 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 GK3PQ14409 553 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 HLXQ14774 488 aaPredicted RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 MICAQ29983 383 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 RSPO1Q2MKA7 263 aaPredicted RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 TMEM155Q4W5P6 130 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 SPRNQ5BIV9 151 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ZNF362Q5T0B9 420 aaPredicted RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 SLC35F1Q5T1Q4 408 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 LCE3BQ5TA77 95 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 DCAF12L2Q5VW00 463 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR2T5Q6IEZ7 315 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR2T2Q6IF00 324 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ZNF770Q6IQ21 691 aaPredicted RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 FAHD2BQ6P2I3 314 aaPredicted RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 SHQ1Q6PI26 577 aaKnown RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 Q6ZR03 302 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 COLCA1Q6ZS62 124 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 RASSF6Q6ZTQ3 369 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 LINC00346Q8IVM7 164 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR5AS1Q8N127 324 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 Q8N3U1 123 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms