RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SGTBQ96EQ0 304 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 TMEM43Q9BTV4 400 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 EGLN1Q9GZT9 426 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 RIBC2Q9H4K1 309 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 PATZ1Q9HBE1 687 aaKnown RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 KRCC1Q9NPI7 259 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 PAPOLBQ9NRJ5 636 aaKnown RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 USE1Q9NZ43 259 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 TRAPPC4Q9Y296 219 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 TRAV36DV7A0A075B6V5 113 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 A8MVM7 634 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 EFCAB9A8MZ26 197 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 ZFPL1O95159 310 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 AHSA1O95433 338 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 SNAP29O95721 258 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 CH25HO95992 272 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 IGHV4-59P01825 116 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 ANXA8P13928 327 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 MAKP20794 623 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 LMO1P25800 156 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 GABRA5P31644 462 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 TGFBR2P37173 567 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 GSSP48637 474 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 H3F3AP84243 136 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 ROR2Q01974 943 aaKnown RBP8.1□□□□□ -1.11
CAPN3-216ENST00000567071 C1orf140Q5VVS0 124 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 KDM4DQ6B0I6 523 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 C1orf94Q6P1W5 598 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 RNF113BQ8IZP6 322 aaKnown RBP8.1□□□□□ -1.11
CAPN3-216ENST00000567071 LINC00471Q8N535 108 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 PACRGLQ8N7B6 248 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 SPERTQ8NA61 448 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 OR9K2Q8NGE7 335 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 GNPDA2Q8TDQ7 276 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 CFHR4Q92496 578 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 DPF1Q92782 380 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 TAAR8Q969N4 342 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 SLC25A36Q96CQ1 311 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 MOGAT1Q96PD6 335 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 SF3B5Q9BWJ5 86 aaKnown RBP8.1□□□□□ -1.11
CAPN3-216ENST00000567071 DGCR6LQ9BY27 220 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 SLC19A3Q9BZV2 496 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 NELFAQ9H3P2 528 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 ZNF556Q9HAH1 456 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 TMEM5Q9Y2B1 443 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 POFUT2Q9Y2G5 429 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 LRCH1Q9Y2L9 728 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 ORC6Q9Y5N6 252 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 NPTNQ9Y639 398 aa8.1□□□□□ -1.11
CAPN3-216ENST00000567071 TRAV27A0A087WT01 109 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 ANKRD61A6NGH8 418 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 UNC119BA6NIH7 251 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 CDC42EP2O14613 210 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 ZNF208O43345 1280 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 BGLAPP02818 100 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 FPR3P25089 353 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 RAD23AP54725 363 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 ARF1P84077 181 aaKnown RBP8.09□□□□□ -1.11
CAPN3-216ENST00000567071 TSPAN31Q12999 210 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 OR7A5Q15622 319 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 ZNF74Q16587 644 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 GPAT4Q86UL3 456 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 SYNPRQ8TBG9 265 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 FANK1Q8TC84 345 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 STK35Q8TDR2 534 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 CYGBQ8WWM9 190 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 GATAD2BQ8WXI9 593 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 DDIT4LQ96D03 193 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 ZNF385AQ96PM9 386 aaKnown RBP8.09□□□□□ -1.11
CAPN3-216ENST00000567071 MBOAT4Q96T53 435 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 PTDSS2Q9BVG9 487 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 MMP28Q9H239 520 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 EGLN3Q9H6Z9 239 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 C8orf4Q9NR00 106 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 SMPD3Q9NY59 655 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-216ENST00000567071 FBLN5Q9UBX5 448 aa8.09□□□□□ -1.11
CAPN3-216ENST00000567071 IGHV2-70DA0A0C4DH43 119 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 H3BN98 237 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 DLGAP1O14490 977 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 TNFRSF13BO14836 293 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-216ENST00000567071 NPIPB7O75200 414 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 OR7A10O76100 309 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 CD79AP11912 226 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 IMPDH2P12268 514 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 ZNF35P13682 527 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 GSTM3P21266 225 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 POU1F1P28069 291 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 GTF2E2P29084 291 aaKnown RBP8.08□□□□□ -1.12
CAPN3-216ENST00000567071 EPHA2P29317 976 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 GRPRP30550 384 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 POLR2IP36954 125 aaKnown RBP8.08□□□□□ -1.12
CAPN3-216ENST00000567071 MMP16P51512 607 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 SEC61A1P61619 476 aaKnown RBP8.08□□□□□ -1.12
CAPN3-216ENST00000567071 SLC35A2P78381 396 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 PRR20EP86478 221 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 PRR20CP86479 221 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 PRR20DP86480 221 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 PRR20BP86481 221 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 PRR20AP86496 221 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 GSG1Q2KHT4 349 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms