RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 RFX3P48380 749 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 KHKP50053 298 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 RPS18P62269 152 aaKnown RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 PITPNAQ00169 270 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 RPA4Q13156 261 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SLAMF1Q13291 335 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 C1orf61Q13536 156 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CCDC58Q4VC31 144 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF542PQ5EBM4 170 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 VWA2Q5GFL6 755 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 RPL13AP3Q6NVV1 102 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SPSB3Q6PJ21 355 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TMEM107Q6UX40 140 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ANGPTL8Q6UXH0 198 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 LRRC17Q8N6Y2 441 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 YIPF7Q8N8F6 280 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 UXS1Q8NBZ7 420 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TEX47Q8TBZ9 253 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SLC5A11Q8WWX8 675 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ASB13Q8WXK3 278 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CORO2AQ92828 525 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 OSTF1Q92882 214 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 FAM71F1Q96KD3 344 aaPredicted RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 GPR137Q96N19 417 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 PINK1Q9BXM7 581 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 FN3KQ9H479 309 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 DPEP2Q9H4A9 486 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 Q9H8V8 135 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 AMBNQ9NP70 447 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 MCUBQ9NWR8 336 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 NUFIP1Q9UHK0 495 aaKnown RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CDH10Q9Y6N8 788 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 PTPN13Q12923 2485 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 IGHV1OR21-1A0A087WYE8 117 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 GSAPA4D1B5 854 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 A8MU76 341 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 INMT-MINDY4F8WBC2 141 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 H0YIG0 161 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 H3BN98 237 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CASKO14936 926 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SOD1P00441 154 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CTSLP07711 333 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 QDPRP09417 244 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ANXA3P12429 323 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CCL4P13236 92 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 LHCGRP22888 699 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 STOMP27105 288 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 AQP1P29972 269 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SLC6A1P30531 599 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 DUTP33316 252 aaKnown RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SOX3P41225 446 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CRISP3P54108 245 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 HSF2Q03933 536 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 LGALS3BPQ08380 585 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TSPAN31Q12999 210 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 DDX39BQ13838 428 aaKnown RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CARTPTQ16568 116 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SLC5A12Q1EHB4 618 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 HENMT1Q5T8I9 393 aaKnown RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 LIPKQ5VXJ0 399 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 HBMQ6B0K9 141 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 OR4C11Q6IEV9 310 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 PYHIN1Q6K0P9 492 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SLC27A4Q6P1M0 643 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 Q6ZPB1 254 aaPredicted RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 GALNT10Q86SR1 603 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SLC51BQ86UW2 128 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 GPALPP1Q8IXQ4 340 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ELMOD2Q8IZ81 293 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ZADH2Q8N4Q0 377 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TBC1D19Q8N5T2 526 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TCEANCQ8N8B7 351 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TTLQ8NG68 377 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 OR9A1PQ8NGU1 263 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 OR52J3Q8NH60 311 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 CDC26Q8NHZ8 85 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 C15orf40Q8WUR7 153 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SMPDL3AQ92484 453 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 PHYHIPQ92561 330 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 MAL2Q969L2 176 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 SMIM14Q96QK8 99 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TTYH2Q9BSA4 534 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TM6SF2Q9BZW4 377 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 RNF167Q9H6Y7 350 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 TIGARQ9NQ88 270 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF701Q9NV72 531 aaPredicted RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 MED9Q9NWA0 146 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 EIF3KQ9UBQ5 218 aaKnown RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 GLS2Q9UI32 602 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ELF5Q9UKW6 265 aaPredicted RBP3.63□□□□□ -1.83
LINC00561-201ENST00000565815 ALG5Q9Y673 324 aa3.63□□□□□ -1.83
LINC00561-201ENST00000565815 KIF26BQ2KJY2 2108 aa3.62□□□□□ -1.83
LINC00561-201ENST00000565815 TRBV4-1A0A0J9YWV2 114 aa3.62□□□□□ -1.83
LINC00561-201ENST00000565815 A0A1W2PQ72 361 aa3.62□□□□□ -1.83
LINC00561-201ENST00000565815 NAP1L6A6NFF2 107 aa3.62□□□□□ -1.83
LINC00561-201ENST00000565815 CTDSPLO15194 276 aa3.62□□□□□ -1.83
LINC00561-201ENST00000565815 SELENOFO60613 162 aa3.62□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF821O75541 412 aaPredicted RBP3.62□□□□□ -1.83
LINC00561-201ENST00000565815 C1orf105O95561 183 aa3.62□□□□□ -1.83
LINC00561-201ENST00000565815 OPN1SWP03999 348 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms